RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ZNF835Q9Y2P0 537 aa2.68□□□□□ -1.98
SCAMP1-205ENST00000614488 IGKV1D-17A0A075B6S4 117 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 PLAC8L1A1L4L8 177 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 MBLAC1A4D2B0 266 aaPredicted RBP2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 B4GALT5O43286 388 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 ZDHHC11BP0C7U3 371 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 LAP3P28838 519 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 CHI3L1P36222 383 aaPredicted RBP2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 GYG1P46976 350 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 RGS4P49798 205 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 HSP90AA5PQ58FG0 334 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 C10orf120Q5SQS8 335 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 Q6ZR03 302 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 H2AFVQ71UI9 128 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 ZNF683Q8IZ20 524 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 FAM86B1Q8N7N1 296 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 VN1R2Q8NFZ6 395 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 ZFP90Q8TF47 636 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 UFD1Q92890 307 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 ZNF430Q9H8G1 570 aaPredicted RBP2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 ZFP14Q9HCL3 533 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 HOXC10Q9NYD6 342 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 LAMP5Q9UJQ1 280 aa2.67□□□□□ -1.98
SCAMP1-205ENST00000614488 A8MXQ7 604 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 TBX19O60806 448 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 IGLV3-19P01714 112 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 IGHV3-43DP0DP04 118 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 PAX7P23759 505 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 CASP4P49662 377 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 CRYBB1P53674 252 aaPredicted RBP2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 ACVR1Q04771 509 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 REG3AQ06141 175 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 GUCA2BQ16661 112 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 TTC23Q5W5X9 447 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 C1orf94Q6P1W5 598 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 CES3Q6UWW8 571 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 ANKFN1Q8N957 763 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 FNDC5Q8NAU1 212 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 ACTRT1Q8TDG2 376 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 MAIP1Q8WWC4 291 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 TBC1D31Q96DN5 1066 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 BMFQ96LC9 184 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 MYCBPQ99417 103 aaPredicted RBP2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 TPPP3Q9BW30 176 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 CAPS2Q9BXY5 557 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 GBA3Q9H227 469 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 LRRN3Q9H3W5 708 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 CTPS2Q9NRF8 586 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 INPP5EQ9NRR6 644 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 XCL2Q9UBD3 114 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 RNF14Q9UBS8 474 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 POLDIP2Q9Y2S7 368 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 TIMM10BQ9Y5J6 103 aa2.66□□□□□ -1.98
SCAMP1-205ENST00000614488 TCRBV9S1A1TA0A576 114 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 H3BNH8 94 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 B4GALT2O60909 372 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 OXSR1O95747 527 aaPredicted RBP2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 IGKV1-17P01599 117 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 IGHDP01880 384 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 BGLAPP02818 100 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 ALDOBP05062 364 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 RHOXF2BP0C7M4 288 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 GKN3PP0CG01 181 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 HSMCR30P0CW71 290 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 CCDC130P13994 396 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 RPL13AP40429 203 aaKnown RBP2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 QARSP47897 775 aaKnown RBP2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 FGF8P55075 233 aaPredicted RBP2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 CBX1P83916 185 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 KLRB1Q12918 225 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 DPYSL2Q16555 572 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 DUSP7Q16829 419 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 TMEM225Q6GV28 225 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 NANOGP8Q6NSW7 305 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 ZDHHC21Q8IVQ6 265 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 ARRDC1Q8N5I2 433 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 UBE2E3Q969T4 207 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 OXGR1Q96P68 337 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 NDFIP1Q9BT67 221 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 ZDHHC4Q9NPG8 344 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 UFSP2Q9NUQ7 469 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 GIN1Q9NXP7 522 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 CALYQ9NYX4 217 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 CHRNA9Q9UGM1 479 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 CABIN1Q9Y6J0 2220 aa2.65□□□□□ -1.99
SCAMP1-205ENST00000614488 KIR2DL5BA0A0G2JN68 375 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 KIR2DL5BA0A0G2JPC4 375 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 A0A0U1RQS6 177 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 PRSS37A4D1T9 235 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 XKRYO14609 159 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 PRKAB2O43741 272 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 ATP5LO75964 103 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 CSF3P09919 207 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF30P17039 623 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 BPIFB3P59826 476 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 ERVK-25P63136 954 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 SPIBQ01892 262 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 NCBP1Q09161 790 aaKnown RBP2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 LCN12Q6JVE5 192 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms