RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ZP4Q12836 540 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 ZNF474Q6S9Z5 364 aaPredicted RBP11.76□□□□□ -0.53
MDC1-209ENST00000613547 TBPL2Q6SJ96 375 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 TMPRSS11FQ6ZWK6 438 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 PXKQ7Z7A4 578 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 OAFQ86UD1 273 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 ZNF385AQ96PM9 386 aaKnown RBP11.76□□□□□ -0.53
MDC1-209ENST00000613547 CCM2LQ9NUG4 571 aaPredicted RBP11.76□□□□□ -0.53
MDC1-209ENST00000613547 B3GAT1Q9P2W7 334 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 BAHCC1Q9P281 2608 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 KIAA1549Q9HCM3 1950 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 PTPN13Q12923 2485 aa11.76□□□□□ -0.53
MDC1-209ENST00000613547 A0A1W2PRG6 482 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 C11orf98E9PRG8 122 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 KRT33AO76009 404 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 HPRP00739 348 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 COX6B1P14854 86 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 MAKP20794 623 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 FUT4P22083 530 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 GPR4P46093 362 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 ERFP50548 548 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 HMGA2P52926 109 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
MDC1-209ENST00000613547 P2RY6Q15077 328 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 MS4A18Q3C1V0 323 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 FBXW9Q5XUX1 488 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 SP5Q6BEB4 398 aaPredicted RBP11.75□□□□□ -0.53
MDC1-209ENST00000613547 NIPAL3Q6P499 406 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 Q6ZT83 130 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 HDDC2Q7Z4H3 204 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 ABHD12BQ7Z5M8 362 aaPredicted RBP11.75□□□□□ -0.53
MDC1-209ENST00000613547 EPHX4Q8IUS5 362 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 ZIC4Q8N9L1 334 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 POMGNT2Q8NAT1 580 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 FAM46AQ96IP4 442 aaKnown RBP11.75□□□□□ -0.53
MDC1-209ENST00000613547 SLCO5A1Q9H2Y9 848 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 ASB6Q9NWX5 421 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 TAS2R5Q9NYW4 299 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 UPB1Q9UBR1 384 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 SAMHD1Q9Y3Z3 626 aaKnown RBP11.75□□□□□ -0.53
MDC1-209ENST00000613547 LYVE1Q9Y5Y7 322 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 ARHGAP21Q5T5U3 1957 aa11.75□□□□□ -0.53
MDC1-209ENST00000613547 DOCK7Q96N67 2140 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 MCIDASD6RGH6 385 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 C16orf97H3BN30 126 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 TRAF3IP2O43734 574 aaPredicted RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 FKBP6O75344 327 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 SLC43A1O75387 559 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 E2F6O75461 281 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 CCNB2O95067 398 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 GRNP28799 593 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 AQP2P41181 271 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 DAP3P51398 398 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 PRPS1P60891 318 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 RPL18Q07020 188 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 SEC23BQ15437 767 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 ZSCAN26Q16670 478 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 ALG10Q5BKT4 473 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 MEX3BQ6ZN04 569 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 PAPD5Q8NDF8 572 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 KISS1RQ969F8 398 aaPredicted RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 UTP4Q969X6 686 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 SPOCK3Q9BQ16 436 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 FUZQ9BT04 418 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 HDHD5Q9BXW7 423 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 ENKD1Q9H0I2 346 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 INIPQ9NRY2 104 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 STX18Q9P2W9 335 aaKnown RBP11.74□□□□□ -0.53
MDC1-209ENST00000613547 DNAJB9Q9UBS3 223 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 MALT1Q9UDY8 824 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 PRSS50Q9UI38 385 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 HIF3AQ9Y2N7 669 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 HECTD1Q9ULT8 2610 aa11.74□□□□□ -0.53
MDC1-209ENST00000613547 TUBAL3A6NHL2 446 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 DEAF1O75398 565 aaPredicted RBP11.73□□□□□ -0.53
MDC1-209ENST00000613547 BCL10O95999 233 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 ADAP00813 363 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 IGHV3-9P01782 118 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 F13BP05160 661 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 HLA-DOBP13765 273 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 PSMB1P20618 241 aaKnown RBP11.73□□□□□ -0.53
MDC1-209ENST00000613547 IL32P24001 234 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 FPR3P25089 353 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 OMPP47874 163 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 LIMS1P48059 325 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 ARHGDIAP52565 204 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 RPS4XP62701 263 aaKnown RBP11.73□□□□□ -0.53
MDC1-209ENST00000613547 FAM27E3Q08E93 113 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 ITGADQ13349 1161 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 CCNIQ14094 377 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms