RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 MED20Q9H944 212 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 CHRNA9Q9UGM1 479 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 SSR3Q9UNL2 185 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 TNRC6AQ8NDV7 1962 aaKnown RBP20.09■□□□□ 0.81
UBE3C-209ENST00000611269 TMEM8BA6NDV4 472 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 IFNGP01579 166 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 ZNF3P17036 446 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 TBR1Q16650 682 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 LRRC17Q8N6Y2 441 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 MDS2Q8NDY4 140 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 FNDC8Q8TC99 324 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 KISS1RQ969F8 398 aaPredicted RBP20.09■□□□□ 0.81
UBE3C-209ENST00000611269 HES7Q9BYE0 225 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 ADAM19Q9H013 955 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 MED11Q9P086 117 aa20.09■□□□□ 0.81
UBE3C-209ENST00000611269 SLC2A5P22732 501 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 NOS3P29474 1203 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 DNASE1L1P49184 302 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 P2RX1P51575 399 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 GPR85P60893 370 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 DPY19L2P2Q6ZN68 376 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 IGFN1Q86VF2 1251 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 ACBD7Q8N6N7 88 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 WDSUB1Q8N9V3 476 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 SNRNP27Q8WVK2 155 aaKnown RBP20.08■□□□□ 0.81
UBE3C-209ENST00000611269 ERMAPQ96PL5 475 aaPredicted RBP20.08■□□□□ 0.81
UBE3C-209ENST00000611269 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.08■□□□□ 0.81
UBE3C-209ENST00000611269 DEPPQ9NTK1 212 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 HAO2Q9NYQ3 351 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 SF3B6Q9Y3B4 125 aaKnown RBP20.08■□□□□ 0.81
UBE3C-209ENST00000611269 CSAG2Q9Y5P2 127 aa20.08■□□□□ 0.81
UBE3C-209ENST00000611269 CCDC182A6NF36 153 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 SNX4O95219 450 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 NUDT14O95848 222 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 BMP4P12644 408 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 MST1P26927 711 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 SOX6P35712 828 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 RPS4XP62701 263 aaKnown RBP20.07■□□□□ 0.8
UBE3C-209ENST00000611269 CRMP1Q14194 572 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 OR51G2Q8NGK0 314 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 OR5W2Q8NH69 310 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 UFD1Q92890 307 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 EXTL1Q92935 676 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 ZNF524Q96C55 264 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 ASPNQ9BXN1 380 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 EXOSC4Q9NPD3 245 aaKnown RBP20.07■□□□□ 0.8
UBE3C-209ENST00000611269 KLHL1Q9NR64 748 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 INPP5EQ9NRR6 644 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 KLHL21Q9UJP4 597 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 CAB39Q9Y376 341 aaPredicted RBP20.07■□□□□ 0.8
UBE3C-209ENST00000611269 PCDHGA9Q9Y5G4 932 aaKnown RBP20.07■□□□□ 0.8
UBE3C-209ENST00000611269 IGLV3-32A0A0A0MS00 114 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 ZNF670-ZNF695F2Z2N8 137 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 ARPC3O15145 178 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 PRPS1P60891 318 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 INAQ16352 499 aa20.07■□□□□ 0.8
UBE3C-209ENST00000611269 KDF1Q8NAX2 398 aaPredicted RBP20.07■□□□□ 0.8
UBE3C-209ENST00000611269 JSRP1Q96MG2 331 aaPredicted RBP20.07■□□□□ 0.8
UBE3C-209ENST00000611269 ATMQ13315 3056 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 IDH3BO43837 385 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 ZNF12P17014 697 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 CNR1P21554 472 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 CD79BP40259 229 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 TNFSF10P50591 281 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 CBFBQ13951 182 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 KLHL12Q53G59 568 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 TRMT61AQ96FX7 289 aaKnown RBP20.06■□□□□ 0.8
UBE3C-209ENST00000611269 GPX7Q96SL4 187 aaPredicted RBP20.06■□□□□ 0.8
UBE3C-209ENST00000611269 NRIP3Q9NQ35 241 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 FBXL2Q9UKC9 423 aa20.06■□□□□ 0.8
UBE3C-209ENST00000611269 MCIDASD6RGH6 385 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 LRRN3E7EW58 273 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 SNPHO15079 494 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 TRIM3O75382 744 aaPredicted RBP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 SP1P08047 785 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 CD97P48960 835 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 TOMM34Q15785 309 aaPredicted RBP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 ZNF74Q16587 644 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 ZNF322Q6U7Q0 402 aaPredicted RBP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 TMPRSS11AQ6ZMR5 421 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 ZNF563Q8TA94 476 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 GPR119Q8TDV5 335 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 TMEM41AQ96HV5 264 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 TXNL4BQ9NX01 149 aaKnown RBP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 IER3IP1Q9Y5U9 82 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 CACNA1GO43497 2377 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 ZC3H12DA2A288 527 aaKnown RBP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 AKAP8O43823 692 aaKnown RBP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 CDC40O60508 579 aaKnown RBP eCLIP20.05■□□□□ 0.8
UBE3C-209ENST00000611269 CD46P15529 392 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 MSX1P28360 303 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 GABRA5P31644 462 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 BDH1Q02338 343 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 SLC25A25Q6KCM7 469 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 CD200R1LQ6Q8B3 271 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 B3GLCTQ6Y288 498 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 PLCZ1Q86YW0 608 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 FADS6Q8N9I5 356 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 OR2M3Q8NG83 312 aa20.05■□□□□ 0.8
UBE3C-209ENST00000611269 OR52E2Q8NGJ4 325 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms