RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, human

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CENPE-208	ENST00000611174	PPP1CA	P62136	330 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	POU4F3	Q15319	338 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	SF3A2	Q15428	464 aa	Known RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	TRAM1	Q15629	374 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	TBC1D25	Q3MII6	688 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	ALKAL2	Q6UX46	152 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	KANSL1	Q7Z3B3	1105 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	CCDC28A	Q8IWP9	274 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	HOXB13	Q92826	284 aa	Predicted RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	RNF170	Q96K19	258 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	GAREM1	Q9H706	876 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	ZNF337	Q9Y3M9	751 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174		M0R082	166 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	TNFSF12	O43508	249 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	SELENOF	O60613	162 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	CD79A	P11912	226 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	GABRA5	P31644	462 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	CAPZA1	P52907	286 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	CD300C	Q08708	224 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	GBX1	Q14549	363 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	1e-6	■■■■□ 26.1
CENPE-208	ENST00000611174	TMEM244	Q5VVB8	128 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	KIRREL2	Q6UWL6	708 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	LRRC28	Q86X40	367 aa	Predicted RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	OR5M1	Q8NGP8	315 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	OR2B2	Q9GZK3	357 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	ACTR6	Q9GZN1	396 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	NOX3	Q9HBY0	568 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	APMAP	Q9HDC9	416 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	SLC6A20	Q9NP91	592 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	WBP1L	Q9NX94	342 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	FBXO9	Q9UK97	447 aa	Predicted RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	MRPS2	Q9Y399	296 aa	Known RBP	4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	EMC9	Q9Y3B6	208 aa		4.36	□□□□□ -1.71
CENPE-208	ENST00000611174	IGLV3-16	A0A075B6K0	115 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	SYNGR4	O95473	234 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	NTN1	O95631	604 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	OR2T7	P0C7T2	308 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	HIST1H1C	P16403	213 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	HOXD12	P35452	270 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	FASLG	P48023	281 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	DLX5	P56178	289 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	UBE2M	P61081	183 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	INSL4	Q14641	139 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	PDSS1	Q5T2R2	415 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TMEM81	Q6P7N7	255 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	ARSK	Q6UWY0	536 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	OR2T27	Q8NH04	317 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	GPR119	Q8TDV5	335 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TCTN2	Q96GX1	697 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	BMF	Q96LC9	184 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	PRDM7	Q9NQW5	492 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TNFRSF10C	O14798	259 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	UTS2	O95399	124 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CNOT4	O95628	575 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CSNK1A1	P48729	337 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	SRP9	P49458	86 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	RACK1	P63244	317 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	LTB	Q06643	244 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CDK10	Q15131	360 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	FAM189A2	Q15884	450 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	GLYATL3	Q5SZD4	288 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	LYPD4	Q6UWN0	246 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	KCTD20	Q7Z5Y7	419 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	PM20D2	Q8IYS1	436 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	LRRC18	Q8N456	261 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	BRIX1	Q8TDN6	353 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	IL1F10	Q8WWZ1	152 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	NAT6	Q93015	286 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CPNE2	Q96FN4	548 aa	Predicted RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CHRD	Q9H2X0	955 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	SLC22A13	Q9Y226	551 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TMED7	Q9Y3B3	224 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	ERCC1	P07992	297 aa	Predicted RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	ZNF28	P17035	718 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CFL1	P23528	166 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	MSX1	P28360	303 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CASP3	P42574	277 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	BID	P55957	195 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	IL13RA1	P78552	427 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	FAM76B	Q5HYJ3	339 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	GPR139	Q6DWJ6	353 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	MEX3B	Q6ZN04	569 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	CD300LF	Q8TDQ1	290 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	DUS3L	Q96G46	650 aa	Known RBP	4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	SMIM3	Q9BZL3	60 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	FAM60A	Q9NP50	221 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	ACOXL	Q9NUZ1	547 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TAS2R8	Q9NYW2	309 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	NEU3	Q9UQ49	428 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174		A6NCN8	305 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	TLCD2	A6NGC4	264 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	HR	O43593	1189 aa		4.35	□□□□□ -1.71
CENPE-208	ENST00000611174	FBXO24	O75426	580 aa		4.35	□□□□□ -1.71

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