RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PDGFBP01127 241 aaPredicted RBP25.43■■□□□ 1.66
CSPG5-205ENST00000610462 OR10A3P58181 314 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 SLC26A5P58743 744 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 IL18Q14116 193 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 P2RY14Q15391 338 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 MAMDC2Q7Z304 686 aaPredicted RBP25.43■■□□□ 1.66
CSPG5-205ENST00000610462 MISPQ8IVT2 679 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 PTDSS2Q9BVG9 487 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 SLC22A4Q9H015 551 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 GAREM1Q9H706 876 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 TAS2R10Q9NYW0 307 aa25.43■■□□□ 1.66
CSPG5-205ENST00000610462 TRAV1-2A0A0B4J238 106 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 FAM25AB3EWG3 89 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 FAM25CB3EWG5 89 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 FAM25GB3EWG6 89 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 YKT6O15498 198 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 SUSD5O60279 629 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 CARTPTQ16568 116 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 ZNF385CQ66K41 422 aaPredicted RBP25.42■■□□□ 1.66
CSPG5-205ENST00000610462 C16orf47Q6ZP98 133 aaPredicted RBP25.42■■□□□ 1.66
CSPG5-205ENST00000610462 GRINAQ7Z429 371 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 NUBPLQ8TB37 319 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 UBL7Q96S82 380 aaPredicted RBP25.42■■□□□ 1.66
CSPG5-205ENST00000610462 SRA1Q9HD15 236 aaKnown RBP25.42■■□□□ 1.66
CSPG5-205ENST00000610462 TAS2R5Q9NYW4 299 aa25.42■■□□□ 1.66
CSPG5-205ENST00000610462 ASCC3Q8N3C0 2202 aaKnown RBP25.41■■□□□ 1.66
CSPG5-205ENST00000610462 TMEM72A0PK05 275 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 RENP00797 406 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 HLA-DQB1P01920 261 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 ELK1P19419 428 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 EMP2P54851 167 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 ZNF684Q5T5D7 378 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 ADGRG3Q86Y34 549 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 Q8N402 240 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 OR2T4Q8NH00 348 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 RASD1Q9Y272 281 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 VSTM2BA6NLU5 285 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 NPIPB7O75200 414 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 SLC2A2P11168 524 aaPredicted RBP25.41■■□□□ 1.66
CSPG5-205ENST00000610462 PSMB10P40306 273 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 TPTEP56180 551 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 RPS11P62280 158 aaKnown RBP eCLIP25.41■■□□□ 1.66
CSPG5-205ENST00000610462 DAB2P98082 770 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 RPS4Y2Q8TD47 263 aa25.41■■□□□ 1.66
CSPG5-205ENST00000610462 A8MVM7 634 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 GPRIN2O60269 458 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 GATBO75879 557 aaKnown RBP25.4■■□□□ 1.66
CSPG5-205ENST00000610462 RAB3BP20337 219 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 GRPRP30550 384 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 PAPD4Q6PIY7 484 aaKnown RBP25.4■■□□□ 1.66
CSPG5-205ENST00000610462 AKAP14Q86UN6 197 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 TIGD4Q8IY51 512 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 C11orf54Q9H0W9 315 aaPredicted RBP25.4■■□□□ 1.66
CSPG5-205ENST00000610462 H7C1C5 153 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 DCTN6O00399 190 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 ARL6IP5O75915 188 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 CFIP05156 583 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 LCN6P62502 163 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 SELENBP1Q13228 472 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 SGCBQ16585 318 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 COL28A1Q2UY09 1125 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 FAM69AQ5T7M9 428 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 NCCRP1Q6ZVX7 275 aaPredicted RBP25.4■■□□□ 1.66
CSPG5-205ENST00000610462 LRRC28Q86X40 367 aaPredicted RBP25.4■■□□□ 1.66
CSPG5-205ENST00000610462 PPP1R3BQ86XI6 285 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 SLC25A36Q96CQ1 311 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 DNAJA3Q96EY1 480 aa25.4■■□□□ 1.66
CSPG5-205ENST00000610462 PRR32B1ATL7 298 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 ZNF354AO60765 605 aaPredicted RBP25.39■■□□□ 1.65
CSPG5-205ENST00000610462 UCHL1P09936 223 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 FBXW4P57775 412 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 OR2B6P58173 313 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 TRIQKQ629K1 86 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 OR6V1Q8N148 313 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 WDR77Q9BQA1 342 aaPredicted RBP25.39■■□□□ 1.65
CSPG5-205ENST00000610462 CYSLTR2Q9NS75 346 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 EXTL2Q9UBQ6 330 aa25.39■■□□□ 1.65
CSPG5-205ENST00000610462 PLA2G10O15496 165 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 CASP3P42574 277 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 EEF1A1P5Q5VTE0 462 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 C1orf140Q5VVS0 124 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 AGAP6Q5VW22 663 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 SLC6A19Q695T7 634 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 UNQ9370/PRO34162Q6UXP9 181 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 KCTD20Q7Z5Y7 419 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 STK35Q8TDR2 534 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 THAP3Q8WTV1 239 aaPredicted RBP25.38■■□□□ 1.65
CSPG5-205ENST00000610462 ADAD1Q96M93 576 aaKnown RBP25.38■■□□□ 1.65
CSPG5-205ENST00000610462 AGAP4Q96P64 663 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 C11orf98E9PRG8 122 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 ZNF517Q6ZMY9 492 aaPredicted RBP25.38■■□□□ 1.65
CSPG5-205ENST00000610462 CDC20BQ86Y33 519 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 RAB43Q86YS6 212 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 UBQLNLQ8IYU4 475 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 C19orf18Q8NEA5 215 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 IFI44Q8TCB0 444 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 PDCD1LG2Q9BQ51 273 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 B3GAT2Q9NPZ5 323 aa25.38■■□□□ 1.65
CSPG5-205ENST00000610462 TRBV11-1A0A0K0K1C0 115 aa25.37■■□□□ 1.65
CSPG5-205ENST00000610462 ARHGEF9O43307 516 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms