RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 NOTCH4Q99466 2003 aa3.13□□□□□ -1.91
AC004542.1-201ENST00000602955 IGHV3OR16-13A0A075B7E8 117 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 IGHV3-48P01763 117 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 IGHV3-23P01764 117 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ANXA5P08758 320 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 NAA10P41227 235 aaPredicted RBP3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 BTDP43251 543 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 RFX3P48380 749 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 SLC11A1P49279 550 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 KLK7P49862 253 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 MEOX2P50222 304 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 EIF3EP60228 445 aaKnown RBP3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 LIPEQ05469 1076 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ILKQ13418 452 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 GSG1Q2KHT4 349 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 HSDL1Q3SXM5 330 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 PRR30Q53SZ7 412 aaPredicted RBP3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 MARCH8Q5T0T0 291 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ATAD3CQ5T2N8 411 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 TIGD3Q6B0B8 471 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 TRIM40Q6P9F5 258 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 PAMR1Q6UXH9 720 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 MOB1BQ7L9L4 216 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ASCL5Q7RTU5 278 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ZNF677Q86XU0 584 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 APOBEC3FQ8IUX4 373 aaKnown RBP3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 C6orf223Q8N319 242 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ZNF564Q8TBZ8 553 aaPredicted RBP3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 MARCH1Q8TCQ1 289 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 FGF14Q92915 247 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 SMARCD2Q92925 531 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 SGK3Q96BR1 496 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 C8orf44Q96CB5 159 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 CCDC126Q96EE4 140 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 ITCHQ96J02 903 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 HSFY1Q96LI6 401 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 PRRC1Q96M27 445 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 CFAP53Q96M91 514 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 GSDMAQ96QA5 445 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 SORT1Q99523 831 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 SLC29A1Q99808 456 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 TEKT3Q9BXF9 490 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 C20orf85Q9H1P6 137 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 GBA3Q9H227 469 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 OR51M1Q9H341 326 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 TMEM165Q9HC07 324 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 PTTG3PQ9NZH4 202 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 PAK5Q9P286 719 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 B4GALT7Q9UBV7 327 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 UGT2A1Q9Y4X1 527 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 FANCIQ9NVI1 1328 aa3.12□□□□□ -1.91
AC004542.1-201ENST00000602955 GON4LQ3T8J9 2241 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 IGLV3-22A0A075B6J6 115 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TRBV9A0A0B4J1U6 114 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 A0A1W2PQ72 361 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 LRRIQ3A6PVS8 624 aaPredicted RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 SIRPB1O00241 398 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TRDMT1O14717 391 aaKnown RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 AIM2O14862 343 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 SERF1AO75920 110 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 CCDC166P0CW27 439 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 GSTM3P21266 225 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ATP6V1B2P21281 511 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 CMA1P23946 247 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 CXCR2P25025 360 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 GTF2E2P29084 291 aaKnown RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 FOXN2P32314 431 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ZNF763Q0D2J5 394 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TMED1Q13445 227 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ITIH4Q14624 930 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ZNF658Q5TYW1 1059 aaPredicted RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 AGBL2Q5U5Z8 902 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 PLCXD3Q63HM9 321 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TWF2Q6IBS0 349 aaKnown RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 C1orf94Q6P1W5 598 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TFAP2EQ6VUC0 442 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 Q6ZN92 141 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ZNF546Q86UE3 836 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 IQCKQ8N0W5 287 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 FBXL13Q8NEE6 735 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 OR1S2Q8NGQ3 325 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 OR1E3Q8WZA6 343 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 NEIL2Q969S2 332 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 KCTD14Q9BQ13 255 aaPredicted RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ANKRD60Q9BZ19 345 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 NEUROG2Q9H2A3 272 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TDRD3Q9H7E2 651 aaKnown RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 LYRM4Q9HD34 91 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 ADAP2Q9NPF8 381 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 TREM2Q9NZC2 230 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 KIF25Q9UIL4 384 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 LSM7Q9UK45 103 aaKnown RBP3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 MMP17Q9ULZ9 603 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 CSAG2Q9Y5P2 127 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 KIF26BQ2KJY2 2108 aa3.11□□□□□ -1.91
AC004542.1-201ENST00000602955 KBTBD11-OT1A0A1B0GTJ5 212 aa3.1□□□□□ -1.91
AC004542.1-201ENST00000602955 SMCO2A6NFE2 343 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms