RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	PLAU	P00749	431 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	DANCR	P0C864	163 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	T-ENOL	P0DO92	83 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	HLA-DOB	P13765	273 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	TNFRSF1B	P20333	461 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	OR1E2	P47887	323 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SELENOP	P49908	381 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	NUDT2	P50583	147 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	NCALD	P61601	193 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	RPS4X	P62701	263 aa	Known RBP	7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SLC25A3	Q00325	362 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	LGALS3BP	Q08380	585 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	DEFB113	Q30KQ7	82 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SPATS1	Q496A3	300 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	TMEM225	Q6GV28	225 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	OR7E24	Q6IFN5	339 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	CASP12	Q6UXS9	341 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	AAED1	Q7RTV5	226 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	VTCN1	Q7Z7D3	282 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	NKAIN4	Q8IVV8	208 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF100	Q8IYN0	542 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	KDM8	Q8N371	416 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	C17orf78	Q8N4C9	275 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	FAM169B	Q8N8A8	192 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	FAM156A	Q8NDB6	213 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	OR5J2	Q8NH18	312 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	VANGL1	Q8TAA9	524 aa	Predicted RBP	7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	PROX1	Q92786	737 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	DHRS1	Q96LJ7	313 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	LRRC37B	Q96QE4	947 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	OR2M2	Q96R28	347 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	FAM107B	Q9H098	131 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	FKRP	Q9H9S5	495 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SPAG4	Q9NPE6	437 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	DCAF13	Q9NV06	445 aa	Known RBP	7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	CRNN	Q9UBG3	495 aa	Predicted RBP	7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF229	Q9UJW7	825 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SLC13A4	Q9UKG4	626 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	ADAM21	Q9UKJ8	722 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SLC7A7	Q9UM01	511 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	SH3GLB1	Q9Y371	365 aa		7.71	□□□□□ -1.18
SSBP4-208	ENST00000600628	TLN2	Q9Y4G6	2542 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	HTR3E	A5X5Y0	456 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	NPIPB13	A6NJU9	1138 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	SHISA9	B4DS77	424 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	NPIPB4	C9JG80	1138 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	OVOL3	O00110	214 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	UPK3A	O75631	287 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	DCTN3	O75935	186 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	IGHV3-9	P01782	118 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	MT-ND1	P03886	318 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	IL32	P24001	234 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	HOXC12	P31275	282 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF133	P52736	654 aa	Predicted RBP	7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	UGT2B15	P54855	530 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	PUDP	Q08623	228 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	FAP	Q12884	760 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	PIN1	Q13526	163 aa	Predicted RBP	7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	PPA1	Q15181	289 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	STK11	Q15831	433 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	ACKR1	Q16570	336 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	HIST3H3	Q16695	136 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	C3orf36	Q3SXR2	165 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	GPAT4	Q86UL3	456 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	WFDC8	Q8IUA0	241 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	OFCC1	Q8IZS5	231 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	PGAM4	Q8N0Y7	254 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	LRRC17	Q8N6Y2	441 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	BCL2L2	Q92843	193 aa	Predicted RBP	7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	SLC25A36	Q96CQ1	311 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF837	Q96EG3	531 aa	Predicted RBP	7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	PLPPR2	Q96GM1	343 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	PRRC1	Q96M27	445 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	HS6ST2	Q96MM7	605 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF75A	Q96N20	296 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	FUZ	Q9BT04	418 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	GRIP2	Q9C0E4	1043 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	SLC17A5	Q9NRA2	495 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	TAGLN3	Q9UI15	199 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	NOX1	Q9Y5S8	564 aa		7.7	□□□□□ -1.18
SSBP4-208	ENST00000600628	ARPC4-TTLL3	A0A0A6YYG9	625 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	HS3ST1	O14792	307 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	TMCC2	O75069	709 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	RAD51D	O75771	328 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	IGLV1-44	P01699	117 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	HOXB1	P14653	301 aa	Predicted RBP	7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF43	P17038	809 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	PAX7	P23759	505 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	SH3BGR	P55822	239 aa	Predicted RBP	7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	CLDN17	P56750	224 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	LSM11	P83369	360 aa	Known RBP eCLIP	7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	TGFBR3	Q03167	851 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	BSPH1	Q075Z2	132 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	LRRC23	Q53EV4	343 aa	Predicted RBP	7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	PHYHD1	Q5SRE7	291 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	TTC33	Q6PID6	262 aa	Predicted RBP	7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	ZNF704	Q6ZNC4	412 aa	Predicted RBP	7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	C20orf204	Q6ZNR8	217 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	TGIF2LY	Q8IUE0	185 aa		7.69	□□□□□ -1.18
SSBP4-208	ENST00000600628	C20orf196	Q8IYI0	205 aa		7.69	□□□□□ -1.18

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