RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MS4A18H0YCH9 400 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 PLPP3O14495 311 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 RRP9O43818 475 aaKnown RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 OR10H3O60404 316 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 CCNB2O95067 398 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 HPRP00739 348 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 CRHP06850 196 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 TMIGD3P0DMS9 266 aaPredicted RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 FCGR1AP12314 374 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 DNAJA1P31689 397 aaKnown RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 KIR2DL2P43627 348 aaPredicted RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 PMS2P3Q13401 168 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 FHL1Q13642 323 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 HSPB2Q16082 182 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 MICAQ29983 383 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 MS4A18Q3C1V0 323 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 GTF2IRD2BQ6EKJ0 949 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 AMIGO2Q86SJ2 522 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 GTF2IRD2Q86UP8 949 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 CCDC71Q8IV32 467 aaPredicted RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 OR9Q2Q8NGE9 314 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 C14orf79Q96F83 325 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 SF3B5Q9BWJ5 86 aaKnown RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 GLRX2Q9NS18 164 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 TAS2R5Q9NYW4 299 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 C6orf203Q9P0P8 240 aaPredicted RBP16.75■□□□□ 0.27
CCDC9-205ENST00000600117 KLHL9Q9P2J3 617 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 RNF6Q9Y252 685 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 RASD1Q9Y272 281 aa16.75■□□□□ 0.27
CCDC9-205ENST00000600117 INTS1Q8N201 2190 aaKnown RBP16.74■□□□□ 0.27
CCDC9-205ENST00000600117 ZNF724A8MTY0 619 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 EFCAB9A8MZ26 197 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 TNFSF13O75888 250 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 VAMP5O95183 116 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 AGAP20933 346 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 CTSSP25774 331 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 GSSP48637 474 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 ZP4Q12836 540 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 POU4F3Q15319 338 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 C1orf94Q6P1W5 598 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 NHLRC1Q6VVB1 395 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 NANOGNBQ7Z5D8 188 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 TUSC5Q8IXB3 177 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 KDM8Q8N371 416 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 LINC00471Q8N535 108 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 OR13C2Q8NGS9 318 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 PKP2Q99959 881 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 FANCFQ9NPI8 374 aa16.74■□□□□ 0.27
CCDC9-205ENST00000600117 LOC102725191A0A1B0GVB3 256 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 SAGP10523 405 aaPredicted RBP16.73■□□□□ 0.27
CCDC9-205ENST00000600117 AGTR1P30556 359 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 UQCRC1P31930 480 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 SLC9A3P48764 834 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 RPS4XP62701 263 aaKnown RBP16.73■□□□□ 0.27
CCDC9-205ENST00000600117 SIRPAP78324 504 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 PUDPQ08623 228 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 TMEM225Q6GV28 225 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
CCDC9-205ENST00000600117 FAM214BQ7L5A3 538 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 EPHX4Q8IUS5 362 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 LIX1LQ8IVB5 337 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 CDK20Q8IZL9 346 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 HS3ST5Q8IZT8 346 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 ZIC4Q8N9L1 334 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 OR10G2Q8NGC3 310 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 OR9K2Q8NGE7 335 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 GIPC3Q8TF64 312 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 OXGR1Q96P68 337 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 KRCC1Q9NPI7 259 aaPredicted RBP16.73■□□□□ 0.27
CCDC9-205ENST00000600117 HIF3AQ9Y2N7 669 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 FLVCR1Q9Y5Y0 555 aa16.73■□□□□ 0.27
CCDC9-205ENST00000600117 ARRDC5A6NEK1 342 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 E2F6O75461 281 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 IL18BPO95998 194 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 PLGP00747 810 aaPredicted RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 GASTP01350 101 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 HIST1H2ABP04908 130 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 YES1P07947 543 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 ADORA3P0DMS8 318 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 HLA-DOBP13765 273 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 FPR3P25089 353 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 NTF4P34130 210 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 IFNGR2P38484 337 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 AQP2P41181 271 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 ELF3P78545 371 aaPredicted RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 RPL18Q07020 188 aaKnown RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 VWA1Q6PCB0 445 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 SHQ1Q6PI26 577 aaKnown RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 HIST3H2AQ7L7L0 130 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 NUFIP2Q7Z417 695 aaKnown RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 GPAT4Q86UL3 456 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 AQP11Q8NBQ7 271 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 OR5K1Q8NHB7 308 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 MOSPD2Q8NHP6 518 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 GNPDA2Q8TDQ7 276 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 HIST1H2ACQ93077 130 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 ZNF775Q96BV0 537 aaPredicted RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
CCDC9-205ENST00000600117 TACO1Q9BSH4 297 aaKnown RBP16.72■□□□□ 0.27
CCDC9-205ENST00000600117 BDH2Q9BUT1 245 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms