RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PLPP3O14495 311 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 BHLHE40O14503 412 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 RNF13O43567 381 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 IDH3BO43837 385 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 PMS2P2O95744 297 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 CELA3AP09093 270 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 SHC1P29353 583 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 SNRPGP62308 76 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 RPS4XP62701 263 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 ERVK-25P63136 954 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 CSNK2BP67870 215 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 CSNK2A1P68400 391 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 RPL18Q07020 188 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 ZP4Q12836 540 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 GXYLT1Q4G148 440 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 RBM48Q5RL73 367 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC35F1Q5T1Q4 408 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 Q6ZS92 163 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 LRRC75AQ8NAA5 344 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 C9orf43Q8TAL5 461 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF417Q8TAU3 575 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 CNIH3Q8TBE1 160 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 FBLIM1Q8WUP2 373 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 HDAC2Q92769 488 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 ZHX1-C8orf76Q96EF9 292 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF587Q96SQ5 575 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 CHST11Q9NPF2 352 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 INIPQ9NRY2 104 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 SCN3BQ9NY72 215 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 H2AFY2Q9P0M6 372 aaPredicted RBP11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 AASSQ9UDR5 926 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 B3GALT5Q9Y2C3 310 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 PDZD2O15018 2839 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TRGV5A0A0B4J1U4 118 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 A0A0J9YW62 118 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 MCIDASD6RGH6 385 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 MS4A18H0YCH9 400 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 IMPA2O14732 288 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TFECO14948 347 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ARPC3O15145 178 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 SURF4O15260 269 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 SEC14L5O43304 696 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 PRKYO43930 277 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 SMNDC1O75940 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 AKR7A3O95154 331 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ACTL6AO96019 429 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 IFNGP01579 166 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 PDGFAP04085 211 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 F13BP05160 661 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 LYNP07948 512 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 CD14P08571 375 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TSPAN19P0C672 248 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 GRNP28799 593 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 UQCRC1P31930 480 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 DIO1P49895 249 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 MLLT10P55197 1068 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 GFRA1P56159 465 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 CARD18P57730 90 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 PMP22Q01453 160 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TEKQ02763 1124 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 MEDAGQ5VYS4 303 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TMEM225Q6GV28 225 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ARHGAP11AQ6P4F7 1023 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ESPNLQ6ZVH7 1005 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ASB18Q6ZVZ8 466 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 RBMXL3Q8N7X1 1067 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 BPIFB6Q8NFQ5 453 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TMEM163Q8TC26 289 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 GPX7Q96SL4 187 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 KATNB1Q9BVA0 655 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC6A15Q9H2J7 730 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 NRIP3Q9NQ35 241 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TIGARQ9NQ88 270 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 GRHPRQ9UBQ7 328 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 KLHL21Q9UJP4 597 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF346Q9UL40 294 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
SHKBP1-209ENST00000595803 A0A1W2PRG6 482 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 SNTNA6NMZ2 147 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 RIIAD1A6NNX1 92 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 K7EM74 188 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 M0R129 80 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 M0R3G1 203 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 TNFSF11O14788 317 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 FAM20BO75063 409 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 TNFAIP8O95379 198 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 APEHP13798 732 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF24P17028 368 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 GABRB1P18505 474 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 FMO3P31513 532 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 CXCR4P61073 352 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 EFNB1P98172 346 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 BCL2A1Q16548 175 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 OCLNQ16625 522 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms