RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MAGEE2Q8TD90 523 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 RCN3Q96D15 328 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF583Q96ND8 569 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 FKRPQ9H9S5 495 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 DLL4Q9NR61 685 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 ARMCX1Q9P291 453 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 POU2F3Q9UKI9 436 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 LAMP3Q9UQV4 416 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 FAM171A2A8MVW0 826 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 SHISA9B4DS77 424 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 RPL36A-HNRNPH2H7BZ11 118 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 M0R1B8 84 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 TRAF3IP2O43734 574 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF432O94892 652 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 OR6A2O95222 327 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 DANCRP0C864 163 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 FOXG1P55316 489 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 UBE2NP61088 152 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 PUDPQ08623 228 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 NPTX1Q15818 432 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 ANKRD16Q6P6B7 361 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 SLC22A25Q6T423 547 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 YTHDF3Q7Z739 585 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 PXKQ7Z7A4 578 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 BIVMQ86UB2 503 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 WDR31Q8NA23 367 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 LZICQ8WZA0 190 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 C18orf12Q96KH6 178 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 HOPXQ9BPY8 73 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 WFDC6Q9BQY6 131 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 BDH2Q9BUT1 245 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 EFCAB1Q9HAE3 211 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 B3GAT2Q9NPZ5 323 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 CISD1Q9NZ45 108 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 SH3GLB1Q9Y371 365 aa15.55■□□□□ 0.08
SHKBP1-204ENST00000594862 VPS13CQ709C8 3753 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 ARPC4-TTLL3A0A0A6YYG9 625 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 ELOVL7A1L3X0 281 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 OR5F1O95221 314 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 THRBP10828 461 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 COX4I1P13073 169 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 IFNA8P32881 189 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 RBM34P42696 430 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 CRYBA2P53672 197 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 ROR2Q01974 943 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 POU3F1Q03052 451 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 C3orf36Q3SXR2 165 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 TBRG1Q3YBR2 411 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 AGAP6Q5VW22 663 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 HACD2Q6Y1H2 254 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 CARM1Q86X55 608 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 CCDC36Q8IYA8 594 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 MICU2Q8IYU8 434 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 KDM8Q8N371 416 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 OR5J2Q8NH18 312 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 CMTM5Q96DZ9 223 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 LRR1Q96L50 414 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 MOGAT1Q96PD6 335 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 OR2M2Q96R28 347 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF426Q9BUY5 554 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 SEC14L4Q9UDX3 406 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF229Q9UJW7 825 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 SLC7A7Q9UM01 511 aa15.54■□□□□ 0.08
SHKBP1-204ENST00000594862 UPK3AO75631 287 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 IGF2P01344 180 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 CDH2P19022 906 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 KDELR2P33947 212 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 ATP5J2P56134 94 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 TAS2R41P59536 307 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF74Q16587 644 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 LRRC23Q53EV4 343 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 CYBRD1Q53TN4 286 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF544Q6NX49 715 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 DTX2Q86UW9 622 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 TMEM123Q8N131 208 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 POU5F2Q8N7G0 328 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 FAM169BQ8N8A8 192 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 POM121Q96HA1 1249 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 ADAD1Q96M93 576 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 DHRS9Q9BPW9 319 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 KCNS3Q9BQ31 491 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 BARX1Q9HBU1 254 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 NANSQ9NR45 359 aa15.53■□□□□ 0.08
SHKBP1-204ENST00000594862 A0A1W2PR80 420 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 HTR3EA5X5Y0 456 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF726A6NNF4 738 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 MS4A18H0YCH9 400 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 OVOL3O00110 214 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 PLPP3O14495 311 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 ENTPD5O75356 428 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 HIST1H2ABP04908 130 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 SOD3P08294 240 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 ADORA3P0DMS8 318 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 BMP4P12644 408 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 CBLP22681 906 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 AHCYP23526 432 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 MS4A18Q3C1V0 323 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 HIKESHIQ53FT3 197 aa15.52■□□□□ 0.08
SHKBP1-204ENST00000594862 HIST3H2AQ7L7L0 130 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms