RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SLCO5A1Q9H2Y9 848 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 MAGIXQ9H6Y5 334 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 RHCGQ9UBD6 479 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 V9GYQ6 96 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 hCG_2039718K7EN88 272 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 ATP6V1B2P21281 511 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 IL32P24001 234 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 EDNRAP25101 427 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 IQCCQ4KMZ1 466 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 ZNF730Q6ZMV8 503 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 PIWIL3Q7Z3Z3 882 aaKnown RBP22.76■■□□□ 1.23
TRIM28-204ENST00000594806 CDK20Q8IZL9 346 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 ANKK1Q8NFD2 765 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 CLPTM1LQ96KA5 538 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 DHRS1Q96LJ7 313 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 WFIKKN1Q96NZ8 548 aa22.76■■□□□ 1.23
TRIM28-204ENST00000594806 HOXB6P17509 224 aaKnown RBP22.75■■□□□ 1.23
TRIM28-204ENST00000594806 AHCYP23526 432 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 CLDN17P56750 224 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 TLE4Q04727 773 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 PRKCDQ05655 676 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 ANKDD1AQ495B1 522 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 NIPAL3Q6P499 406 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 MBOAT2Q6ZWT7 520 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 NANOGNBQ7Z5D8 188 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 CCDC124Q96CT7 223 aaKnown RBP22.75■■□□□ 1.23
TRIM28-204ENST00000594806 BPIFA2Q96DR5 249 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 LINC00470Q9BZP3 86 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 ACTR6Q9GZN1 396 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 MCCC2Q9HCC0 563 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 C20orf141Q9NUB4 165 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 TAS2R16Q9NYV7 291 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 TAS2R5Q9NYW4 299 aa22.75■■□□□ 1.23
TRIM28-204ENST00000594806 SETXQ7Z333 2677 aaKnown RBP22.75■■□□□ 1.23
TRIM28-204ENST00000594806 A0A087WUU8 490 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 TCRBV5S2A0A599 114 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 ACOT8O14734 319 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 TRAF3IP2O43734 574 aaPredicted RBP22.74■■□□□ 1.23
TRIM28-204ENST00000594806 ZNF432O94892 652 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 HPRP00739 348 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 IFI30P13284 250 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 IGHV1-2P23083 117 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 FOXD4Q12950 439 aaPredicted RBP22.74■■□□□ 1.23
TRIM28-204ENST00000594806 C1QTNF12Q5T7M4 302 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 TSPO2Q5TGU0 170 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 BHLHA15Q7RTS1 189 aaPredicted RBP22.74■■□□□ 1.23
TRIM28-204ENST00000594806 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.74■■□□□ 1.23
TRIM28-204ENST00000594806 P2RY8Q86VZ1 359 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 ZDHHC21Q8IVQ6 265 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 LRRC17Q8N6Y2 441 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 ZNF433Q8N7K0 673 aaPredicted RBP22.74■■□□□ 1.23
TRIM28-204ENST00000594806 MMADHCQ9H3L0 296 aaPredicted RBP22.74■■□□□ 1.23
TRIM28-204ENST00000594806 SLC7A10Q9NS82 523 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 TMEM5Q9Y2B1 443 aa22.74■■□□□ 1.23
TRIM28-204ENST00000594806 CENPEQ02224 2701 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 FAM221AA4D161 298 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 AQP12BA6NM10 295 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 A6NNC1 897 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 PDLIM1O00151 329 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 GSC2O15499 205 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 SLC43A1O75387 559 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 IGHV3-9P01782 118 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 POU3F1Q03052 451 aaPredicted RBP22.73■■□□□ 1.23
TRIM28-204ENST00000594806 TGFBR3Q03167 851 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 FAPQ12884 760 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 FAM98BQ52LJ0 330 aaKnown RBP22.73■■□□□ 1.23
TRIM28-204ENST00000594806 OR7E24Q6IFN5 339 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 NHLRC1Q6VVB1 395 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 AQP12AQ8IXF9 295 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 NRMQ8IXM6 262 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 SLC7A13Q8TCU3 470 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 HSD17B8Q92506 261 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 KRCC1Q9NPI7 259 aaPredicted RBP22.73■■□□□ 1.23
TRIM28-204ENST00000594806 ALPK2Q86TB3 2170 aa22.73■■□□□ 1.23
TRIM28-204ENST00000594806 CRYBG3Q68DQ2 2970 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 RNF13O43567 381 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 KRT33AO76009 404 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 TSPAN19P0C672 248 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 CRYGSP22914 178 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 MPGP29372 298 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 MAGEA2P43356 314 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 SLC9A3P48764 834 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 SELENOPP49908 381 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 CHRNB3Q05901 458 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 C1orf162Q8NEQ5 155 aaPredicted RBP22.72■■□□□ 1.23
TRIM28-204ENST00000594806 LRR1Q96L50 414 aa22.72■■□□□ 1.23
TRIM28-204ENST00000594806 ADAD1Q96M93 576 aaKnown RBP22.72■■□□□ 1.23
TRIM28-204ENST00000594806 NBPF19A0A087WUL8 3843 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 ZNF726A6NNF4 738 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 C11orf98E9PRG8 122 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 BLOC1S5-TXNDC5H3BN57 136 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 PIP5K1CO60331 668 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 KRT36O76013 467 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 GADD45GO95257 159 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 HLA-DOBP13765 273 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 PRF1P14222 555 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 FUT4P22083 530 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 FGD3Q5JSP0 725 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 ANKRD34AQ69YU3 496 aa22.71■■□□□ 1.23
TRIM28-204ENST00000594806 PODNL1Q6PEZ8 512 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms