RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CA10Q9NS85 328 aa15.07■□□□□ 0
LIG1-206ENST00000594067 FANCMQ8IYD8 2048 aa15.07■□□□□ 0
LIG1-206ENST00000594067 A0A087WUJ7 227 aa15.07■□□□□ 0
LIG1-206ENST00000594067 TNFRSF10CO14798 259 aa15.07■□□□□ 0
LIG1-206ENST00000594067 ST6GAL1P15907 406 aa15.07■□□□□ 0
LIG1-206ENST00000594067 RAD52P43351 418 aa15.07■□□□□ 0
LIG1-206ENST00000594067 ZNF141Q15928 474 aa15.07■□□□□ 0
LIG1-206ENST00000594067 TUSC1Q2TAM9 212 aa15.07■□□□□ 0
LIG1-206ENST00000594067 MANEAQ5SRI9 462 aa15.07■□□□□ 0
LIG1-206ENST00000594067 LEG1Q6P5S2 330 aa15.07■□□□□ 0
LIG1-206ENST00000594067 TMEM81Q6P7N7 255 aa15.07■□□□□ 0
LIG1-206ENST00000594067 Q6ZSR6 202 aa15.07■□□□□ 0
LIG1-206ENST00000594067 GATSQ8NAP1 163 aa15.07■□□□□ 0
LIG1-206ENST00000594067 SLC37A2Q8TED4 501 aa15.07■□□□□ 0
LIG1-206ENST00000594067 RGP1Q92546 391 aaPredicted RBP15.07■□□□□ 0
LIG1-206ENST00000594067 MRGPRX1Q96LB2 322 aa15.07■□□□□ 0
LIG1-206ENST00000594067 CMTM3Q96MX0 182 aa15.07■□□□□ 0
LIG1-206ENST00000594067 TSSK2Q96PF2 358 aa15.07■□□□□ 0
LIG1-206ENST00000594067 TSPAN10Q9H1Z9 355 aaPredicted RBP15.07■□□□□ 0
LIG1-206ENST00000594067 SDHAF2Q9NX18 166 aa15.07■□□□□ 0
LIG1-206ENST00000594067 KLK11Q9UBX7 282 aa15.07■□□□□ 0
LIG1-206ENST00000594067 MFSD2BA6NFX1 497 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ARPC1BO15143 372 aaKnown RBP15.06■□□□□ 0
LIG1-206ENST00000594067 ZNF749O43361 778 aa15.06■□□□□ 0
LIG1-206ENST00000594067 GPRIN2O60269 458 aa15.06■□□□□ 0
LIG1-206ENST00000594067 DPP4P27487 766 aa15.06■□□□□ 0
LIG1-206ENST00000594067 MAT1AQ00266 395 aaKnown RBP15.06■□□□□ 0
LIG1-206ENST00000594067 C7orf61Q8IZ16 206 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ZNF511Q8NB15 262 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ELMOD3Q96FG2 381 aa15.06■□□□□ 0
LIG1-206ENST00000594067 Q96M85 177 aa15.06■□□□□ 0
LIG1-206ENST00000594067 DZANK1Q9NVP4 752 aa15.06■□□□□ 0
LIG1-206ENST00000594067 MGAT4CQ9UBM8 478 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ZNF281Q9Y2X9 895 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ANKRD61A6NGH8 418 aa15.06■□□□□ 0
LIG1-206ENST00000594067 NPIPB9F8W1W9 429 aa15.06■□□□□ 0
LIG1-206ENST00000594067 BLOC1S5-TXNDC5H3BN57 136 aa15.06■□□□□ 0
LIG1-206ENST00000594067 AIPO00170 330 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ZFPL1O95159 310 aa15.06■□□□□ 0
LIG1-206ENST00000594067 CD1AP06126 327 aa15.06■□□□□ 0
LIG1-206ENST00000594067 IFI6P09912 130 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ZP3P21754 424 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ELFN2Q5R3F8 820 aa15.06■□□□□ 0
LIG1-206ENST00000594067 SPICQ8N5J4 248 aa15.06■□□□□ 0
LIG1-206ENST00000594067 HMGB4Q8WW32 186 aa15.06■□□□□ 0
LIG1-206ENST00000594067 WDR89Q96FK6 387 aaPredicted RBP15.06■□□□□ 0
LIG1-206ENST00000594067 GAS2L1Q99501 681 aaPredicted RBP15.06■□□□□ 0
LIG1-206ENST00000594067 NMNAT2Q9BZQ4 307 aa15.06■□□□□ 0
LIG1-206ENST00000594067 LIN7BQ9HAP6 207 aa15.06■□□□□ 0
LIG1-206ENST00000594067 ZNF337Q9Y3M9 751 aa15.06■□□□□ 0
LIG1-206ENST00000594067 GABARAPH6UMI1 98 aa15.05■□□□□ 0
LIG1-206ENST00000594067 FOXS1O43638 330 aa15.05■□□□□ 0
LIG1-206ENST00000594067 ITGA10O75578 1167 aa15.05■□□□□ 0
LIG1-206ENST00000594067 BTG2P78543 158 aa15.05■□□□□ 0
LIG1-206ENST00000594067 SLC25A25Q6KCM7 469 aa15.05■□□□□ 0
LIG1-206ENST00000594067 APOOLQ6UXV4 268 aa15.05■□□□□ 0
LIG1-206ENST00000594067 GLDNQ6ZMI3 551 aaPredicted RBP15.05■□□□□ 0
LIG1-206ENST00000594067 OR6V1Q8N148 313 aa15.05■□□□□ 0
LIG1-206ENST00000594067 OR13H1Q8NG92 308 aa15.05■□□□□ 0
LIG1-206ENST00000594067 C3orf49Q96BT1 292 aa15.05■□□□□ 0
LIG1-206ENST00000594067 TMEM106CQ9BVX2 250 aa15.05■□□□□ 0
LIG1-206ENST00000594067 B3GNT4Q9C0J1 378 aa15.05■□□□□ 0
LIG1-206ENST00000594067 Q9N2J8 555 aa15.05■□□□□ 0
LIG1-206ENST00000594067 OR10H1Q9Y4A9 318 aa15.05■□□□□ 0
LIG1-206ENST00000594067 SZT2Q5T011 3432 aa15.05■□□□□ 0
LIG1-206ENST00000594067 SERINC4A6NH21 518 aa15.05■□□□□ -0
LIG1-206ENST00000594067 L7N2F9 121 aa15.05■□□□□ -0
LIG1-206ENST00000594067 PDCD5O14737 125 aa15.05■□□□□ -0
LIG1-206ENST00000594067 KHDRBS3O75525 346 aaKnown RBP15.05■□□□□ -0
LIG1-206ENST00000594067 ECDO95905 644 aaPredicted RBP15.05■□□□□ -0
LIG1-206ENST00000594067 OR8G3PP0DMU2 310 aa15.05■□□□□ -0
LIG1-206ENST00000594067 CPN1P15169 458 aa15.05■□□□□ -0
LIG1-206ENST00000594067 POU3F2P20265 443 aaPredicted RBP15.05■□□□□ -0
LIG1-206ENST00000594067 AQP2P41181 271 aa15.05■□□□□ -0
LIG1-206ENST00000594067 CDKN2AP42771 156 aaKnown RBP15.05■□□□□ -0
LIG1-206ENST00000594067 UBE2IP63279 158 aaKnown RBP15.05■□□□□ -0
LIG1-206ENST00000594067 BTN1A1Q13410 526 aa15.05■□□□□ -0
LIG1-206ENST00000594067 SLC35D3Q5M8T2 416 aa15.05■□□□□ -0
LIG1-206ENST00000594067 LINC01590Q5TEZ4 76 aa15.05■□□□□ -0
LIG1-206ENST00000594067 RGS7BPQ6MZT1 257 aaPredicted RBP15.05■□□□□ -0
LIG1-206ENST00000594067 FAAP20Q6NZ36 180 aa15.05■□□□□ -0
LIG1-206ENST00000594067 FAM198BQ6UWH4 519 aa15.05■□□□□ -0
LIG1-206ENST00000594067 C10orf53Q8N6V4 93 aa15.05■□□□□ -0
LIG1-206ENST00000594067 TOE1Q96GM8 510 aaKnown RBP15.05■□□□□ -0
LIG1-206ENST00000594067 AIFM2Q9BRQ8 373 aa15.05■□□□□ -0
LIG1-206ENST00000594067 ALG12Q9BV10 488 aa15.05■□□□□ -0
LIG1-206ENST00000594067 MTIF3Q9H2K0 278 aaKnown RBP15.05■□□□□ -0
LIG1-206ENST00000594067 FKRPQ9H9S5 495 aa15.05■□□□□ -0
LIG1-206ENST00000594067 NOX3Q9HBY0 568 aa15.05■□□□□ -0
LIG1-206ENST00000594067 V9GY05 133 aa15.05■□□□□ -0
LIG1-206ENST00000594067 NAP1L6A6NFF2 107 aa15.04■□□□□ -0
LIG1-206ENST00000594067 ARPC3O15145 178 aa15.04■□□□□ -0
LIG1-206ENST00000594067 PPM1BO75688 479 aa15.04■□□□□ -0
LIG1-206ENST00000594067 KRT33AO76009 404 aa15.04■□□□□ -0
LIG1-206ENST00000594067 GLCEO94923 617 aa15.04■□□□□ -0
LIG1-206ENST00000594067 CT45A8P0DMV1 189 aa15.04■□□□□ -0
LIG1-206ENST00000594067 CT45A9P0DMV2 189 aa15.04■□□□□ -0
LIG1-206ENST00000594067 IFNGR1P15260 489 aa15.04■□□□□ -0
LIG1-206ENST00000594067 C4BPBP20851 252 aa15.04■□□□□ -0
LIG1-206ENST00000594067 NFYAP23511 347 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms