RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PDSS1Q5T2R2 415 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 CCDC71Q8IV32 467 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 LYSMD2Q8IV50 215 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 ZNF540Q8NDQ6 660 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 ATP6V1C2Q8NEY4 427 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 MBD3L2Q8NHZ7 208 aaPredicted RBP17.6■□□□□ 0.41
LSM4-203ENST00000593829 MCFD2Q8NI22 146 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 ASB5Q8WWX0 329 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 WNT2BQ93097 391 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 ADGRG7Q96K78 797 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 PSMG3-AS1Q96PY0 264 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 RIBC2Q9H4K1 309 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 SLC13A4Q9UKG4 626 aa17.6■□□□□ 0.41
LSM4-203ENST00000593829 COL12A1Q99715 3063 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 A0A0G2JNJ9 132 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 A0A0J9YW62 118 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 HSPB2A8KAH6 182 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 TOXO94900 526 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 PTTG1O95997 202 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 PRG2P13727 222 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 CEACAM8P31997 349 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 EIF1AXP47813 144 aaKnown RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 COPZ1P61923 177 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 PPP1R8Q12972 351 aaKnown RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 HSPB2Q16082 182 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 SGCBQ16585 318 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 TMEM176BQ3YBM2 270 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 ZNF362Q5T0B9 420 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 C3orf33Q6P1S2 294 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 POMZP3Q6PJE2 187 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 CCDC80Q76M96 950 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 OR10D3Q8NH80 312 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 OR2V1Q8NHB1 315 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 ZHX1-C8orf76Q96EF9 292 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 TM9SF2Q99805 663 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 PAQR5Q9NXK6 330 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 KLHL28Q9NXS3 571 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 Q9UFV3 132 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 DOPEY1Q5JWR5 2465 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 NCOA6Q14686 2063 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 EFCAB9A8MZ26 197 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 TNFSF11O14788 317 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 FRS3O43559 492 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 FAM20BO75063 409 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 CD36P16671 472 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 SHC1P29353 583 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 CHRNB4P30926 498 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 KRR1Q13601 381 aaKnown RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 ZNF404Q494X3 552 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 HBMQ6B0K9 141 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 FAHD1Q6P587 224 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 SNX29P2Q8IUI4 249 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 CA5BP1Q8WTZ4 195 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 ZNF845Q96IR2 970 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 CTPS2Q9NRF8 586 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 PLCXD1Q9NUJ7 323 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 RPS6KA6Q9UK32 745 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 SPIN1Q9Y657 262 aaPredicted RBP17.59■□□□□ 0.41
LSM4-203ENST00000593829 U3KQV3 271 aa17.59■□□□□ 0.41
LSM4-203ENST00000593829 SLC22A20A6NK97 555 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 OPN1SWP03999 348 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 POLR2HP52434 150 aaKnown RBP17.58■□□□□ 0.4
LSM4-203ENST00000593829 WBP2NLQ6ICG8 309 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 PLXDC2Q6UX71 529 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 GALNT5Q7Z7M9 940 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 C9orf106Q8NAJ2 232 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 SLC25A43Q8WUT9 341 aaPredicted RBP17.58■□□□□ 0.4
LSM4-203ENST00000593829 EVA1AQ9H8M9 152 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 CHRNA9Q9UGM1 479 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 ZNF175Q9Y473 711 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 TESMINQ9Y4I5 508 aa17.58■□□□□ 0.4
LSM4-203ENST00000593829 CLDN14O95500 239 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 FADS2O95864 444 aaKnown RBP17.57■□□□□ 0.4
LSM4-203ENST00000593829 TGM6O95932 706 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 FKBP2P26885 142 aaKnown RBP17.57■□□□□ 0.4
LSM4-203ENST00000593829 TACR3P29371 465 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 PCYT1AP49585 367 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 CARD18P57730 90 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 LSM3P62310 102 aaKnown RBP17.57■□□□□ 0.4
LSM4-203ENST00000593829 ZNF45Q02386 682 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 TEKQ02763 1124 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 PON3Q15166 354 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 TBCEQ15813 527 aaPredicted RBP17.57■□□□□ 0.4
LSM4-203ENST00000593829 P4HA3Q7Z4N8 544 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 COMTD1Q86VU5 262 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 ADGRG3Q86Y34 549 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 CADM2Q8N3J6 435 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 RASSF5Q8WWW0 418 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 OSTF1Q92882 214 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 ZFP3Q96NJ6 502 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 ADAM19Q9H013 955 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 DCSTAMPQ9H295 470 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 TIGARQ9NQ88 270 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 ZNF229Q9UJW7 825 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 ARHGAP21Q5T5U3 1957 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 A1L4Q6 167 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 CXCL13O43927 109 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 RCBTB2O95199 551 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 TPTEP56180 551 aa17.57■□□□□ 0.4
LSM4-203ENST00000593829 HOXC5Q00444 222 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms