RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MFSD8Q8NHS3 518 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 FANK1Q8TC84 345 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 RNF128Q8TEB7 428 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SAMD8Q96LT4 415 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 HS6ST2Q96MM7 605 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 MBOAT4Q96T53 435 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 BDH2Q9BUT1 245 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 TAPBPLQ9BX59 468 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SLC19A3Q9BZV2 496 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 FKRPQ9H9S5 495 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 KCNJ16Q9NPI9 418 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 TAS2R5Q9NYW4 299 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 C6orf203Q9P0P8 240 aaPredicted RBP8.58□□□□□ -1.04
DDX39A-220ENST00000593008 STX18Q9P2W9 335 aaKnown RBP8.58□□□□□ -1.04
DDX39A-220ENST00000593008 ADAM18Q9Y3Q7 739 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 NCOA6Q14686 2063 aaPredicted RBP8.58□□□□□ -1.04
DDX39A-220ENST00000593008 ABCA12Q86UK0 2595 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MS4A18H0YCH9 400 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 BLOC1S5-TXNDC5H3BN57 136 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 DLGAP1O14490 977 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 PLPP3O14495 311 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 TRAF3IP2O43734 574 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 PPP1R3DO95685 299 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 BMP5P22003 454 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 PTGER4P35408 488 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 RAC3P60763 192 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 ERVK-25P63136 954 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 SLC35A1P78382 337 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 H3F3AP84243 136 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 POU3F1Q03052 451 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 RUNX1T1Q06455 604 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 SLC34A1Q06495 639 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 PMS2P3Q13401 168 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 DAG1Q14118 895 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MS4A18Q3C1V0 323 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 ZIK1Q3SY52 487 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 SLC36A3Q495N2 470 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 RIPPLY2Q5TAB7 128 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 EEF1A1P5Q5VTE0 462 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 TMEM236Q5W0B7 351 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MEX3BQ6ZN04 569 aaKnown RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF620Q6ZNG0 422 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 TMPRSS11FQ6ZWK6 438 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 NUFIP2Q7Z417 695 aaKnown RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MCEMP1Q8IX19 187 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 LRRC75AQ8NAA5 344 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 OR9K2Q8NGE7 335 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 OR5J2Q8NH18 312 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 ZPLD1Q8TCW7 415 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MAGEE2Q8TD90 523 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 GNPDA2Q8TDQ7 276 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 TXNDC15Q96J42 360 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF385AQ96PM9 386 aaKnown RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 TSPAN32Q96QS1 320 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 PSD2Q9BQI7 771 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 DGCR6LQ9BY27 220 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 KLHL4Q9C0H6 718 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 NPDC1Q9NQX5 325 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 NANSQ9NR45 359 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MED29Q9NX70 200 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 PAQR5Q9NXK6 330 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 MRPL39Q9NYK5 338 aaKnown RBP8.57□□□□□ -1.04
DDX39A-220ENST00000593008 KIF17Q9P2E2 1029 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF229Q9UJW7 825 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 SIGLEC7Q9Y286 467 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 FBN2P35556 2912 aa8.57□□□□□ -1.04
DDX39A-220ENST00000593008 DCHS2Q6V1P9 2916 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 H7C1C5 153 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 PTP4A3O75365 173 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 SYNGR4O95473 234 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 ADAP00813 363 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 IL2RAP01589 272 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 IGHV3-9P01782 118 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 ALPLP05186 524 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 ADORA3P0DMS8 318 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 HOXB6P17509 224 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 AHCYP23526 432 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 IGFBP5P24593 272 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 POU1F1P28069 291 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 GTF2E2P29084 291 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 CLK1P49759 484 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 RPS3AP61247 264 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 LCN6P62502 163 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 CSNK2A1P68400 391 aaPredicted RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 TFF3Q07654 80 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 TSPAN31Q12999 210 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 SNTB1Q13884 538 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 OGFRL1Q5TC84 451 aaPredicted RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 OTPQ5XKR4 325 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 CARD17Q5XLA6 110 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 NSUN5P2Q63ZY6 315 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 KDM4DQ6B0I6 523 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 VWA1Q6PCB0 445 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 PAQR6Q6TCH4 344 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 NHLRC1Q6VVB1 395 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 H1FNTQ75WM6 255 aaPredicted RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 RRM2BQ7LG56 351 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 P4HA3Q7Z4N8 544 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 OAFQ86UD1 273 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 HIPK1Q86Z02 1210 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms