RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MAKP20794 623 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 IL11P20809 199 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 POU1F1P28069 291 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 SFTPDP35247 375 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 GIPRP48546 466 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 CLDN18P56856 261 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 CSNK2BP67870 215 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 CDK5Q00535 292 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 MYBPC1Q00872 1141 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 C3AR1Q16581 482 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 RBM48Q5RL73 367 aaKnown RBP10.65□□□□□ -0.7
DDX39A-219ENST00000592927 SLC27A4Q6P1M0 643 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 C3orf33Q6P1S2 294 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 ZNF585AQ6P3V2 769 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 CASP12Q6UXS9 341 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 Q6ZPB1 254 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-219ENST00000592927 ADGRG3Q86Y34 549 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 KIF18BQ86Y91 864 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 UBQLNLQ8IYU4 475 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 OR6S1Q8NH40 331 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 FAM81AQ8TBF8 368 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 HDAC2Q92769 488 aaKnown RBP10.65□□□□□ -0.7
DDX39A-219ENST00000592927 PRDM14Q9GZV8 571 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 C20orf141Q9NUB4 165 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 IMPAD1Q9NX62 359 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 CHRNA9Q9UGM1 479 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 TMED7Q9Y3B3 224 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 PKDREJQ9NTG1 2253 aa10.65□□□□□ -0.7
DDX39A-219ENST00000592927 TRAV36DV7A0A075B6V5 113 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 TRGV8A0A0C4DH27 118 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 FIGNL2A6NMB9 653 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 A8MVM7 634 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 AHRRA9YTQ3 701 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CCL21O00585 134 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CDC42EP2O14613 210 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ZNF208O43345 1280 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 WDR1O75083 606 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 OR7A10O76100 309 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SOX14O95416 240 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 MT-ATP6P00846 226 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CCDC159P0C7I6 412 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 TFPIP10646 304 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 GABRA1P14867 456 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CLDN20P56880 219 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 RPS3AP61247 264 aaKnown RBP10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CD47Q08722 323 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CDK5R2Q13319 367 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 GINS1Q14691 196 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 MAD2L1BPQ15013 274 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SF3B4Q15427 424 aaKnown RBP eCLIP10.64□□□□□ -0.716e-8■■■□□ 18.8
DDX39A-219ENST00000592927 TMEM176BQ3YBM2 270 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ZBED5Q49AG3 693 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 KCTD21Q4G0X4 260 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 EMC4Q5J8M3 183 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 C6orf141Q5SZD1 244 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 PDSS1Q5T2R2 415 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 C12orf73Q69YU5 71 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 XKRXQ6PP77 449 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SMARCD3Q6STE5 483 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 RPTNQ6XPR3 784 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ESPNLQ6ZVH7 1005 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 CHMP1BQ7LBR1 199 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 OAFQ86UD1 273 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 DOLPP1Q86YN1 238 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ENTHD1Q8IYW4 607 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ZNF786Q8N393 782 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 OR52L1Q8NGH7 329 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 RHOXF1Q8NHV9 184 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 FANK1Q8TC84 345 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SLC25A43Q8WUT9 341 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ZNF566Q969W8 418 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 KLHL15Q96M94 604 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 NDEL1Q9GZM8 345 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 OR52D1Q9H346 318 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 TP63Q9H3D4 680 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-219ENST00000592927 TBC1D23Q9NUY8 699 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SCOCQ9UIL1 159 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SH3BGRL2Q9UJC5 107 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 ZNF229Q9UJW7 825 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 BLOC1S6Q9UL45 172 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 BAIAP2Q9UQB8 552 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 SIGLEC7Q9Y286 467 aa10.64□□□□□ -0.71
DDX39A-219ENST00000592927 TMEM72A0PK05 275 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 SH3D21A4FU49 640 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 H0YC42 278 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 EIF1AYO14602 144 aaKnown RBP10.63□□□□□ -0.71
DDX39A-219ENST00000592927 OR2T1O43869 369 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 NPIPB7O75200 414 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 PTP4A3O75365 173 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 HMGN1P05114 100 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 HOXD4P09016 255 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-219ENST00000592927 FUT1P19526 365 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 ACVR2AP27037 513 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 SHC1P29353 583 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 CA7P43166 264 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 CLK1P49759 484 aaKnown RBP10.63□□□□□ -0.71
DDX39A-219ENST00000592927 SUCLG1P53597 346 aaKnown RBP10.63□□□□□ -0.71
DDX39A-219ENST00000592927 PRPS1P60891 318 aa10.63□□□□□ -0.71
DDX39A-219ENST00000592927 SNRPGP62308 76 aaKnown RBP10.63□□□□□ -0.71
DDX39A-219ENST00000592927 EGR4Q05215 589 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms