RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MOGAT1Q96PD6 335 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 PCDHAC1Q9H158 963 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 LIME1Q9H400 295 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 B3GAT2Q9NPZ5 323 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 CCM2LQ9NUG4 571 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-227ENST00000591849 SEC14L4Q9UDX3 406 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 MALT1Q9UDY8 824 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 ADAM21Q9UKJ8 722 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 MED31Q9Y3C7 131 aa8.88□□□□□ -0.99
BRCA1-227ENST00000591849 A0A1W2PR80 420 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 B2RBV5 119 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 LRRN3E7EW58 273 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 MS4A18H0YCH9 400 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 BLOC1S5-TXNDC5H3BN57 136 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 PLPP3O14495 311 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 RNF13O43567 381 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 WNT11O96014 354 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 FUT1P19526 365 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 COX5AP20674 150 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 RBM34P42696 430 aaKnown RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 ART1P52961 327 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 IST1P53990 364 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 PRPS1P60891 318 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 UBE2NP61088 152 aaKnown RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 ROR2Q01974 943 aaKnown RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 POU3F1Q03052 451 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 LTBQ06643 244 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 KRT72Q14CN4 511 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 TRAM2Q15035 370 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF74Q16587 644 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 MS4A18Q3C1V0 323 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 PAMR1Q6UXH9 720 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 LINC00114Q6XXX2 140 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF704Q6ZNC4 412 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 CBLL1Q75N03 491 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 NKAIN4Q8IVV8 208 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 CDK20Q8IZL9 346 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 DEFB107AQ8IZN7 70 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 DEPDC4Q8N2C3 294 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 PIK3C3Q8NEB9 887 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 TMEM255BQ8WV15 326 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 NINJ1Q92982 152 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 MCUR1Q96AQ8 359 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 PRRC1Q96M27 445 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 MUS81Q96NY9 551 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 HS3ST6Q96QI5 342 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 C1QTNF6Q9BXI9 259 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 PLEKHF2Q9H8W4 249 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 FKRPQ9H9S5 495 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 RHCGQ9UBD6 479 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 ABCD2Q9UBJ2 740 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 SAMD4AQ9UPU9 718 aaKnown RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 RCE1Q9Y256 329 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 AMDHD2Q9Y303 409 aa8.87□□□□□ -0.99
BRCA1-227ENST00000591849 MAGED1Q9Y5V3 778 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-227ENST00000591849 LOC102725191A0A1B0GVB3 256 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 A0A1W2PRG6 482 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 MCIDASD6RGH6 385 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 M0R1B8 84 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 M0R3G1 203 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 SIAH2O43255 324 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 UPK3AO75631 287 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 OR7A10O76100 309 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 LYPD3O95274 346 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 STAMBPO95630 424 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 BCL10O95999 233 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 MT-ND1P03886 318 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 THY1P04216 161 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 ITGA5P08648 1049 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF83P51522 516 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 FOXG1P55316 489 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-227ENST00000591849 LGALS3BPQ08380 585 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 CAMK2DQ13557 499 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 GABRA6Q16445 453 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 ACKR1Q16570 336 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 NCMAPQ5T1S8 102 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 TMEM108Q6UXF1 575 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF730Q6ZMV8 503 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 WDR88Q6ZMY6 472 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 PXKQ7Z7A4 578 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 PIAS4Q8N2W9 510 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-227ENST00000591849 C17orf78Q8N4C9 275 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 LRRC17Q8N6Y2 441 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 C1orf162Q8NEQ5 155 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-227ENST00000591849 ANKK1Q8NFD2 765 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 PFN4Q8NHR9 129 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 BCAS4Q8TDM0 211 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 NSMCE2Q96MF7 247 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 KCNS3Q9BQ31 491 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 PRSS27Q9BQR3 290 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 EMC6Q9BV81 110 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 LINC00470Q9BZP3 86 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 AMBRA1Q9C0C7 1298 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 SLC17A5Q9NRA2 495 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 MED29Q9NX70 200 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 B3GAT1Q9P2W7 334 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 MAGEL2Q9UJ55 1249 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 ZNF229Q9UJW7 825 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 POU2F3Q9UKI9 436 aa8.86□□□□□ -0.99
BRCA1-227ENST00000591849 POFUT2Q9Y2G5 429 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms