RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 ITGA5P08648 1049 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 ITGA2P17301 1181 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 MPGP29372 298 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 YAP1P46937 504 aaKnown RBP13.46□□□□□ -0.25
MBD1-219ENST00000589733 PPA1Q15181 289 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 ALKBH2Q6NS38 261 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 KLHL24Q6TFL4 600 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 PXKQ7Z7A4 578 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 C17orf78Q8N4C9 275 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 PIK3C3Q8NEB9 887 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 ANKK1Q8NFD2 765 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 PFN4Q8NHR9 129 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 ALKBH3Q96Q83 286 aaPredicted RBP13.46□□□□□ -0.25
MBD1-219ENST00000589733 LINC00470Q9BZP3 86 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 MUC13Q9H3R2 512 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 ANKRD19PQ9H560 264 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 MEPEQ9NQ76 525 aaPredicted RBP13.46□□□□□ -0.25
MBD1-219ENST00000589733 PRPF19Q9UMS4 504 aaKnown RBP13.46□□□□□ -0.25
MBD1-219ENST00000589733 ENPP4Q9Y6X5 453 aa13.46□□□□□ -0.25
MBD1-219ENST00000589733 ITPR2Q14571 2701 aa13.46□□□□□ -0.26
MBD1-219ENST00000589733 DCHS2Q6V1P9 2916 aa13.46□□□□□ -0.26
MBD1-219ENST00000589733 ABCA12Q86UK0 2595 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 FBN2P35556 2912 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.45□□□□□ -0.26
MBD1-219ENST00000589733 OR5H1A6NKK0 313 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 C11orf98E9PRG8 122 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 MS4A18H0YCH9 400 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 PDLIM1O00151 329 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 ASAH2BP0C7U1 165 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 SH3BGRP55822 239 aaPredicted RBP13.45□□□□□ -0.26
MBD1-219ENST00000589733 ZP4Q12836 540 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
MBD1-219ENST00000589733 TAB1Q15750 504 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 MS4A18Q3C1V0 323 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 MTX3Q5HYI7 312 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 HMBOX1Q6NT76 420 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 GPR137CQ8N3F9 429 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 MCUR1Q96AQ8 359 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 C1orf21Q9H246 121 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 B3GAT2Q9NPZ5 323 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 AMDHD2Q9Y303 409 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 V9GYQ6 96 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 APCP25054 2843 aa13.45□□□□□ -0.26
MBD1-219ENST00000589733 ZNF726A6NNF4 738 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 J3KTA2 159 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 RNF13O43567 381 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 SERPINI2O75830 405 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 STAMBPO95630 424 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 HPRP00739 348 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 RHCEP18577 417 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 C9orf135Q5VTT2 229 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 ZNF730Q6ZMV8 503 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 C22orf34Q6ZV56 151 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 RRM2BQ7LG56 351 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 SLC46A3Q7Z3Q1 461 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 HDDC2Q7Z4H3 204 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 CDK20Q8IZL9 346 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
MBD1-219ENST00000589733 NINJ1Q92982 152 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 PLPPR2Q96GM1 343 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 PYURFQ96I23 114 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 ADAD1Q96M93 576 aaKnown RBP13.44□□□□□ -0.26
MBD1-219ENST00000589733 OR2M2Q96R28 347 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 ESRP2Q9H6T0 727 aaKnown RBP13.44□□□□□ -0.26
MBD1-219ENST00000589733 KRCC1Q9NPI7 259 aaPredicted RBP13.44□□□□□ -0.26
MBD1-219ENST00000589733 RHCGQ9UBD6 479 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 MAGED1Q9Y5V3 778 aaPredicted RBP13.44□□□□□ -0.26
MBD1-219ENST00000589733 ANKRD17O75179 2603 aaKnown RBP13.44□□□□□ -0.26
MBD1-219ENST00000589733 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
MBD1-219ENST00000589733 hCG_2039718K7EN88 272 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 SIAH2O43255 324 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 KLF4O43474 513 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 UPK3AO75631 287 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 ZNF432O94892 652 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 H1F0P07305 194 aaKnown RBP13.43□□□□□ -0.26
MBD1-219ENST00000589733 IFI30P13284 250 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 HLA-DOBP13765 273 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 FUT1P19526 365 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 MSX2P35548 267 aaPredicted RBP13.43□□□□□ -0.26
MBD1-219ENST00000589733 ROR2Q01974 943 aaKnown RBP13.43□□□□□ -0.26
MBD1-219ENST00000589733 GABRA6Q16445 453 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 PAMR1Q6UXH9 720 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 RINLQ6ZS11 566 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 SLC35D2Q76EJ3 337 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 RNF113BQ8IZP6 322 aaKnown RBP13.43□□□□□ -0.26
MBD1-219ENST00000589733 LRRC17Q8N6Y2 441 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 POP5Q969H6 163 aaKnown RBP13.43□□□□□ -0.26
MBD1-219ENST00000589733 BPIFA2Q96DR5 249 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 MUS81Q96NY9 551 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 MAN2C1Q9NTJ4 1040 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 C20orf141Q9NUB4 165 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 MED29Q9NX70 200 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 ACTR3BQ9P1U1 418 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 ST6GALNAC2Q9UJ37 374 aa13.43□□□□□ -0.26
MBD1-219ENST00000589733 A0A1W2PRG6 482 aa13.42□□□□□ -0.26
MBD1-219ENST00000589733 MCIDASD6RGH6 385 aa13.42□□□□□ -0.26
MBD1-219ENST00000589733 BLOC1S5-TXNDC5H3BN57 136 aa13.42□□□□□ -0.26
MBD1-219ENST00000589733 FFAR1O14842 300 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms