RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 C3orf36Q3SXR2 165 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 NIPAL3Q6P499 406 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 TMEM108Q6UXF1 575 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 LINGO2Q7L985 606 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 PXKQ7Z7A4 578 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 CARM1Q86X55 608 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 TMEM123Q8N131 208 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 OR5J2Q8NH18 312 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
TPM4-209ENST00000588483 AKAP1Q92667 903 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM4-209ENST00000588483 FBXW5Q969U6 566 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 CMTM5Q96DZ9 223 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 LRR1Q96L50 414 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 ELAC2Q9BQ52 826 aaKnown RBP9.2□□□□□ -0.94
TPM4-209ENST00000588483 PRSS27Q9BQR3 290 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 NSRP1Q9H0G5 558 aaKnown RBP9.2□□□□□ -0.94
TPM4-209ENST00000588483 FKRPQ9H9S5 495 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 EFCAB1Q9HAE3 211 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 MOV10Q9HCE1 1003 aaKnown RBP9.2□□□□□ -0.94
TPM4-209ENST00000588483 SLC7A7Q9UM01 511 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 NOX1Q9Y5S8 564 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
TPM4-209ENST00000588483 NF1P21359 2839 aa9.2□□□□□ -0.94
TPM4-209ENST00000588483 HEATR1Q9H583 2144 aaKnown RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ARPC4-TTLL3A0A0A6YYG9 625 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 GMNCA6NCL1 334 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 OVOL3O00110 214 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 NME4O00746 187 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 PLPP3O14495 311 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 SMPD2O60906 423 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 SLC43A1O75387 559 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 UPK3AO75631 287 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 HPRP00739 348 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ASAH2BP0C7U1 165 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 CD40P25942 277 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 SLC7A2P52569 658 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 CLDN17P56750 224 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 SLC25A3Q00325 362 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ZP4Q12836 540 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 FOXD4Q12950 439 aaPredicted RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 CYBRD1Q53TN4 286 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 TTC33Q6PID6 262 aaPredicted RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 KLHL17Q6TDP4 642 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ZNF627Q7L945 461 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 DTX2Q86UW9 622 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 P3H2Q8IVL5 708 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 UEVLDQ8IX04 471 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 KDM8Q8N371 416 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 FAM169BQ8N8A8 192 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 PIK3C3Q8NEB9 887 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 KBTBD8Q8NFY9 601 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 OR1K1Q8NGR3 316 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 OR52N5Q8NH56 324 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 LIPHQ8WWY8 451 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ALKBH3Q96Q83 286 aaPredicted RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 OR2M2Q96R28 347 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 NELFAQ9H3P2 528 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ALG2Q9H553 416 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 CXorf56Q9H5V9 222 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 MEPEQ9NQ76 525 aaPredicted RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 CRNNQ9UBG3 495 aaPredicted RBP9.19□□□□□ -0.94
TPM4-209ENST00000588483 ZNF229Q9UJW7 825 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 SH3GLB1Q9Y371 365 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
TPM4-209ENST00000588483 HTR3EA5X5Y0 456 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 LRRN3E7EW58 273 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 ABCD4O14678 606 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 CLOCKO15516 846 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 ARHGEF9O43307 516 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 WNT11O96014 354 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 MT-ND1P03886 318 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 TSPAN19P0C672 248 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 HLA-DOBP13765 273 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 CD99P14209 185 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 NQO1P15559 274 aaKnown RBP9.18□□□□□ -0.94
TPM4-209ENST00000588483 PTH2RP49190 550 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 PRPS1P60891 318 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 LIPEQ05469 1076 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 LGALS3BPQ08380 585 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 PMS2P3Q13401 168 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 C1DQ13901 141 aaKnown RBP9.18□□□□□ -0.94
TPM4-209ENST00000588483 PGGHGQ32M88 737 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 TBRG1Q3YBR2 411 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 LRRC23Q53EV4 343 aaPredicted RBP9.18□□□□□ -0.94
TPM4-209ENST00000588483 ANKRD16Q6P6B7 361 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 CBLL1Q75N03 491 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 SLC46A3Q7Z3Q1 461 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 PIGWQ7Z7B1 504 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 C20orf196Q8IYI0 205 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 SMAP2Q8WU79 429 aaPredicted RBP9.18□□□□□ -0.94
TPM4-209ENST00000588483 TMEM171Q8WVE6 324 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 BCL2L2Q92843 193 aaPredicted RBP9.18□□□□□ -0.94
TPM4-209ENST00000588483 PRRC1Q96M27 445 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 GPR35Q9HC97 309 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 NANSQ9NR45 359 aa9.18□□□□□ -0.94
TPM4-209ENST00000588483 TAS2R5Q9NYW4 299 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms