RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CALHM3Q86XJ0 350 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 RBM45Q8IUH3 476 aaKnown RBP17.12■□□□□ 0.33
TPM4-208ENST00000588410 PIK3C3Q8NEB9 887 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 ADAMTS16Q8TE57 1224 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 SLC41A3Q96GZ6 507 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 DHRS9Q9BPW9 319 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 TRAF4Q9BUZ4 470 aaPredicted RBP17.12■□□□□ 0.33
TPM4-208ENST00000588410 MRPL39Q9NYK5 338 aaKnown RBP17.12■□□□□ 0.33
TPM4-208ENST00000588410 BAG5Q9UL15 447 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 ATP23Q9Y6H3 246 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 TRAPPC13A5PLN9 417 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 E7EQL1 145 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 ZNF432O94892 652 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 OR6A2O95222 327 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 MT-ATP6P00846 226 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 AHCYP23526 432 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 FABP6P51161 128 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 LTBQ06643 244 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 VEZF1Q14119 521 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 ANKRD16Q6P6B7 361 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 CLEC9AQ6UXN8 241 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 FBXL14Q8N1E6 418 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 ANKK1Q8NFD2 765 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 BOD1Q96IK1 185 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 COX4I2Q96KJ9 171 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 MOGAT1Q96PD6 335 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 ZNF317Q96PQ6 595 aaPredicted RBP17.11■□□□□ 0.33
TPM4-208ENST00000588410 SMR3AQ99954 134 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 KCNS3Q9BQ31 491 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 ARMCX1Q9P291 453 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 SLC7A7Q9UM01 511 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 NOX1Q9Y5S8 564 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 MED13LQ71F56 2210 aa17.11■□□□□ 0.33
TPM4-208ENST00000588410 A0A096LPE4 126 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 A0A1W2PPZ6 126 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 MS4A18H0YCH9 400 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 TRAF3IP2O43734 574 aaPredicted RBP17.1■□□□□ 0.33
TPM4-208ENST00000588410 TTKP33981 857 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 POU3F1Q03052 451 aaPredicted RBP17.1■□□□□ 0.33
TPM4-208ENST00000588410 PUDPQ08623 228 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 ETFDHQ16134 617 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 MS4A18Q3C1V0 323 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 CARD17Q5XLA6 110 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 LINGO2Q7L985 606 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 DTX2Q86UW9 622 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 CIARTQ8N365 385 aaPredicted RBP17.1■□□□□ 0.33
TPM4-208ENST00000588410 OR4D11Q8NGI4 311 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 C10orf82Q8WW14 230 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 BCL2L2Q92843 193 aaPredicted RBP17.1■□□□□ 0.33
TPM4-208ENST00000588410 MPP4Q96JB8 637 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 HS6ST2Q96MM7 605 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 OR2M2Q96R28 347 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 GRIP2Q9C0E4 1043 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 SH3GLB1Q9Y371 365 aa17.1■□□□□ 0.33
TPM4-208ENST00000588410 ZNF726A6NNF4 738 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 LRRN3E7EW58 273 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 RPL36A-HNRNPH2H7BZ11 118 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 PLPP3O14495 311 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 ATP8B1O43520 1251 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 CCDC22O60826 627 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 SERPINI2O75830 405 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 HPRP00739 348 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 CD8AP01732 235 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 HLA-DOBP13765 273 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 HOXB1P14653 301 aaPredicted RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 ARF1P84077 181 aaKnown RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 CLEC12BQ2HXU8 276 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 ZNF544Q6NX49 715 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 LINC00114Q6XXX2 140 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 CARM1Q86X55 608 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 MUC15Q8N387 334 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 OR5J2Q8NH18 312 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 RP9Q8TA86 221 aaKnown RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 MAGEE2Q8TD90 523 aaPredicted RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 RCN3Q96D15 328 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 ADAD1Q96M93 576 aaKnown RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 ZNF583Q96ND8 569 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 SLC38A2Q96QD8 506 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 PCDHAC1Q9H158 963 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 BARX1Q9HBU1 254 aaPredicted RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 CRLF2Q9HC73 371 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 GPR35Q9HC97 309 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 MOV10Q9HCE1 1003 aaKnown RBP17.09■□□□□ 0.33
TPM4-208ENST00000588410 B3GAT2Q9NPZ5 323 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 CBLN4Q9NTU7 201 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 FREM1Q5H8C1 2179 aa17.09■□□□□ 0.33
TPM4-208ENST00000588410 ARPC4-TTLL3A0A0A6YYG9 625 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 FAM220BPB1ANY3 271 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 M0R3G1 203 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 KPNA4O00629 521 aaPredicted RBP17.08■□□□□ 0.32
TPM4-208ENST00000588410 CH25HO95992 272 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 HIST1H2ABP04908 130 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 ADORA3P0DMS8 318 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 CEACAM16Q2WEN9 425 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 LRRC23Q53EV4 343 aaPredicted RBP17.08■□□□□ 0.32
TPM4-208ENST00000588410 B3GLCTQ6Y288 498 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 DEF8Q6ZN54 512 aa17.08■□□□□ 0.32
TPM4-208ENST00000588410 Q71RC1 249 aaPredicted RBP17.08■□□□□ 0.32
TPM4-208ENST00000588410 HIST3H2AQ7L7L0 130 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms