RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 C19orf48Q6RUI8 117 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 ATCAYQ86WG3 371 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 GPALPP1Q8IXQ4 340 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 OR10H4Q8NGA5 316 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 NXPE2Q96DL1 559 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 ZMYND19Q96E35 227 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-204ENST00000587339 TMEM41AQ96HV5 264 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 TBX5Q99593 518 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 RPRD1BQ9NQG5 326 aaKnown RBP17.89■□□□□ 0.45
TRIM47-204ENST00000587339 SACM1LQ9NTJ5 587 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 CPAMD8Q8IZJ3 1885 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 DAPL1A0PJW8 107 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 PLGP00747 810 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 TIMM50Q3ZCQ8 353 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 GLYR1Q49A26 553 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 SLC35D3Q5M8T2 416 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ABHD17BQ5VST6 288 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 TMEM99Q8N816 258 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 SCAIQ8N9R8 606 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 CLEC1AQ8NC01 280 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 OR52N1Q8NH53 320 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 NDNFQ8TB73 568 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ADAMTS14Q8WXS8 1223 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 TM9SF4Q92544 642 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 FER1L6-AS2Q96M78 137 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ARHGAP9Q9BRR9 750 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 OR51E2Q9H255 320 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 TMEM185BQ9H7F4 350 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 INPP5EQ9NRR6 644 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 PROB1E7EW31 1015 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 XKRYO14609 159 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 CBR3O75828 277 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 IMPDH2P12268 514 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 FKBP2P26885 142 aaKnown RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 PUDPQ08623 228 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 MYBPHQ13203 477 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 SELENBP1Q13228 472 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ACKR1Q16570 336 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 H1FNTQ75WM6 255 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ASCL5Q7RTU5 278 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ARIH2OSQ8N7S6 290 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ZNF485Q8NCK3 441 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 ZNF248Q8NDW4 579 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 SLC25A43Q8WUT9 341 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 SMPDL3BQ92485 455 aa17.88■□□□□ 0.45
TRIM47-204ENST00000587339 RPH3AQ9Y2J0 694 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 CAB39Q9Y376 341 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-204ENST00000587339 EML6Q6ZMW3 1958 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 LOC100506127A0A0U1RQW1 187 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 LIPT2A6NK58 231 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 AHCYL1O43865 530 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 CD79BP40259 229 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 DNASE1L1P49184 302 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 DIO1P49895 249 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 SLC25A1P53007 311 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 RPL27P61353 136 aaKnown RBP17.87■□□□□ 0.45
TRIM47-204ENST00000587339 ACTC1P68032 377 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 ACTA1P68133 377 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 GGTLC2Q14390 218 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 LIPKQ5VXJ0 399 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 TMPRSS11AQ6ZMR5 421 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 PHC2Q8IXK0 858 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 GTPBP8Q8N3Z3 284 aaPredicted RBP17.87■□□□□ 0.45
TRIM47-204ENST00000587339 POMGNT2Q8NAT1 580 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 OR6K6Q8NGW6 343 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 CNN2Q99439 309 aaKnown RBP17.87■□□□□ 0.45
TRIM47-204ENST00000587339 CHCHD6Q9BRQ6 235 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 ALG8Q9BVK2 526 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 ISYNA1Q9NPH2 558 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 NDUFB11Q9NX14 153 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 ALKBH4Q9NXW9 302 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 DKKL1Q9UK85 242 aa17.87■□□□□ 0.45
TRIM47-204ENST00000587339 RIF1Q5UIP0 2472 aaKnown RBP17.87■□□□□ 0.45
TRIM47-204ENST00000587339 ARHGEF9O43307 516 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 TRIM3O75382 744 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-204ENST00000587339 RENP00797 406 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 CPEP16870 476 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 PSMA1P25786 263 aaKnown RBP17.86■□□□□ 0.45
TRIM47-204ENST00000587339 TLE3Q04726 772 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 GALEQ14376 348 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 ZNF322Q6U7Q0 402 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-204ENST00000587339 TMPRSS7Q7RTY8 843 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 ADCK1Q86TW2 530 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 ZNF227Q86WZ6 799 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 ZNRF4Q8WWF5 429 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 ZHX1-C8orf76Q96EF9 292 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 TSSK2Q96PF2 358 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 OR5B2Q96R09 309 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 UBL7Q96S82 380 aaPredicted RBP17.86■□□□□ 0.45
TRIM47-204ENST00000587339 TXNIPQ9H3M7 391 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 LRFN1Q9P244 771 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 ABI3Q9P2A4 366 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 A0A1W2PRG6 482 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 H7C1C5 153 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 GLCEO94923 617 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 F10P00742 488 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 OPN1LWP04000 364 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 LIPCP11150 499 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 CASRP41180 1078 aa17.86■□□□□ 0.45
TRIM47-204ENST00000587339 RPS3AP61247 264 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms