RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 KCTD8Q6ZWB6 473 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 NUP54Q7Z3B4 507 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ZER1Q7Z7L7 766 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 COMTD1Q86VU5 262 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 GPALPP1Q8IXQ4 340 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 DND1Q8IYX4 353 aaKnown RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 SIMC1Q8NDZ2 872 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 FAM71CQ8NEG0 241 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 RHOXF1Q8NHV9 184 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 NEIL3Q8TAT5 605 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 CNIH3Q8TBE1 160 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 TMEM239Q8WW34 195 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 RORBQ92753 470 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 RNASE6Q93091 150 aaKnown RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 RFKQ969G6 155 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ADIPOR1Q96A54 375 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 SARAFQ96BY9 339 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ZG16BQ96DA0 208 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ARSGQ96EG1 525 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 GAL3ST4Q96RP7 486 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 TSC22D3Q99576 134 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 OCSTAMPQ9BR26 566 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 COPS4Q9BT78 406 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 PLEKHF2Q9H8W4 249 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 TBC1D23Q9NUY8 699 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 IL20Q9NYY1 176 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 PTTG2Q9NZH5 202 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 REV1Q9UBZ9 1251 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 RPL36Q9Y3U8 105 aaKnown RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 CHST2Q9Y4C5 530 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 CDH10Q9Y6N8 788 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 FREM3P0C091 2139 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ARHGAP21Q5T5U3 1957 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TUBAL3A6NHL2 446 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 GTPBP1O00178 669 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 FRS3O43559 492 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 EIF4E2O60573 245 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 TPST2O60704 377 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 HCN1O60741 890 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TRAPPC6AO75865 159 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 CD53P19397 219 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 GDF1P27539 372 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 POU1F1P28069 291 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 POLR2IP36954 125 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 OMPP47874 163 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 SLC9A3P48764 834 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 PCYT1AP49585 367 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ASCL1P50553 236 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TMBIM6P55061 237 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 CDH15P55291 814 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 SUMO3P55854 103 aaPredicted RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 FBXW4P57775 412 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 PRKCDQ05655 676 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 CRYZQ08257 329 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 FOXF2Q12947 444 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 OCLNQ16625 522 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 HYAL4Q2M3T9 481 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ARMC4Q5T2S8 1044 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 SLC22A10Q63ZE4 541 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ANKRD34AQ69YU3 496 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 WBP2NLQ6ICG8 309 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 OPN5Q6U736 354 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 C5orf46Q6UWT4 87 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ZNF620Q6ZNG0 422 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TMPRSS11FQ6ZWK6 438 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 OLIG3Q7RTU3 272 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 BIVMQ86UB2 503 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 NRMQ8IXM6 262 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 PRR22Q8IZ63 422 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 SPARTQ8N0X7 666 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 STX19Q8N4C7 294 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 OR2T33Q8NG76 320 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 SLC22A8Q8TCC7 542 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 PAQR8Q8TEZ7 354 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 FAM222BQ8WU58 562 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 RAB2BQ8WUD1 216 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TMCO6Q96DC7 493 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 MBD6Q96DN6 1003 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 SPACA9Q96E40 222 aaPredicted RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 FAM46AQ96IP4 442 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 PLEKHA8Q96JA3 519 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 GNRHR2Q96P88 292 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TRIB1Q96RU8 372 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 MYCBPQ99417 103 aaPredicted RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 TIMP4Q99727 224 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ZNF426Q9BUY5 554 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 TBL1XR1Q9BZK7 514 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 CCDC90BQ9GZT6 254 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 RBM38Q9H0Z9 239 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 NXF5Q9H1B4 397 aaKnown RBP7.03□□□□□ -1.28
VMP1-204ENST00000587259 FN3KQ9H479 309 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 CXorf56Q9H5V9 222 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 ZFP64Q9NPA5 681 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 PGPEP1Q9NXJ5 209 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 PSORS1C1Q9UIG5 152 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 KCNE5Q9UJ90 142 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.03□□□□□ -1.28
VMP1-204ENST00000587259 CAMK2AQ9UQM7 478 aa7.03□□□□□ -1.28
VMP1-204ENST00000587259 DTX4Q9Y2E6 619 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms