RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ZIC4Q8N9L1 334 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 ANKK1Q8NFD2 765 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 OR4C15Q8NGM1 316 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 RNASE6Q93091 150 aaKnown RBP17■□□□□ 0.31
DDX39A-204ENST00000586558 APH1AQ96BI3 265 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 ZNF775Q96BV0 537 aaPredicted RBP17■□□□□ 0.31
DDX39A-204ENST00000586558 PSMG3-AS1Q96PY0 264 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 OPN3Q9H1Y3 402 aaPredicted RBP17■□□□□ 0.31
DDX39A-204ENST00000586558 C12orf49Q9H741 205 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 TAS2R5Q9NYW4 299 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 DNAJB9Q9UBS3 223 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 RCE1Q9Y256 329 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 INTS1Q8N201 2190 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 BLOC1S5-TXNDC5H3BN57 136 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 GNGT2O14610 69 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 TRAF3IP2O43734 574 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 OR10H3O60404 316 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 DEAF1O75398 565 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 CNOT4O95628 575 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 HPRP00739 348 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 GPR4P46093 362 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 OMPP47874 163 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 RPS4XP62701 263 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 KPNB1Q14974 876 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 CASP12Q6UXS9 341 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 BEND4Q6ZU67 534 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 LUZP2Q86TE4 346 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 KDM8Q8N371 416 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 ZNF610Q8N9Z0 462 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 FAM46AQ96IP4 442 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 ZNF385AQ96PM9 386 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 RBM24Q9BX46 236 aaKnown RBP16.99■□□□□ 0.31
DDX39A-204ENST00000586558 NDEL1Q9GZM8 345 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 VNN3Q9NY84 501 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 ELOVL5Q9NYP7 299 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 HIF3AQ9Y2N7 669 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 AP4S1Q9Y587 144 aa16.99■□□□□ 0.31
DDX39A-204ENST00000586558 OR6C65A6NJZ3 312 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 KLF4O43474 513 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 RNF13O43567 381 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 CCNB2O95067 398 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 CLDN1O95832 211 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 FCGR1AP12314 374 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 AHCYP23526 432 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 FPR3P25089 353 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 POU3F1Q03052 451 aaPredicted RBP16.98■□□□□ 0.31
DDX39A-204ENST00000586558 RPL18Q07020 188 aaKnown RBP16.98■□□□□ 0.31
DDX39A-204ENST00000586558 TAF11Q15544 211 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 AAED1Q7RTV5 226 aa16.98■□□□□ 0.31
DDX39A-204ENST00000586558 NPIPB13A6NJU9 1138 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 NPIPB4C9JG80 1138 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 C11orf98E9PRG8 122 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 CDC42EP2O14613 210 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 CLOCKO15516 846 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 HNRNPRO43390 633 aaKnown RBP16.97■□□□□ 0.31
DDX39A-204ENST00000586558 PEX19P40855 299 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 CLDN17P56750 224 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 PRPS1P60891 318 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 MICAQ29983 383 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 ZBED5Q49AG3 693 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 ZFP1Q6P2D0 407 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 ZNF474Q6S9Z5 364 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-204ENST00000586558 NHLRC1Q6VVB1 395 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 Q6ZT83 130 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 ZER1Q7Z7L7 766 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 KIF18BQ86Y91 864 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 OR13C2Q8NGS9 318 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 GALNT8Q9NY28 637 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 MALT1Q9UDY8 824 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 U3KQV3 271 aa16.97■□□□□ 0.31
DDX39A-204ENST00000586558 A0A1W2PRG6 482 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 A1L4Q6 167 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 ARRDC5A6NEK1 342 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 PRSS44E7EML9 344 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 E2F6O75461 281 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 TIPRLO75663 272 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 HLA-DOBP13765 273 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 DNAJA1P31689 397 aaKnown RBP16.96■□□□□ 0.31
DDX39A-204ENST00000586558 NTF4P34130 210 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 CD79BP40259 229 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 AQP2P41181 271 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 SORDQ00796 357 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 P2RY6Q15077 328 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 ALG10Q5BKT4 473 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 FBXW9Q5XUX1 488 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 ZNF770Q6IQ21 691 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-204ENST00000586558 C1orf94Q6P1W5 598 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 PGBD2Q6P3X8 592 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 MEX3DQ86XN8 651 aaKnown RBP16.96■□□□□ 0.31
DDX39A-204ENST00000586558 POMGNT2Q8NAT1 580 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 GNPDA2Q8TDQ7 276 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 ADAD1Q96M93 576 aaKnown RBP16.96■□□□□ 0.31
DDX39A-204ENST00000586558 SLCO5A1Q9H2Y9 848 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 DENND2DQ9H6A0 471 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-204ENST00000586558 NPDC1Q9NQX5 325 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-204ENST00000586558 INIPQ9NRY2 104 aa16.96■□□□□ 0.31
DDX39A-204ENST00000586558 PTPN13Q12923 2485 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 TRAV27A0A087WT01 109 aa16.95■□□□□ 0.3
DDX39A-204ENST00000586558 UNC119BA6NIH7 251 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms