RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PRSS50Q9UI38 385 aa12.2□□□□□ -0.46
PRKCSH-202ENST00000585540 AMDHD2Q9Y303 409 aa12.2□□□□□ -0.46
PRKCSH-202ENST00000585540 ADGRG4Q8IZF6 3080 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 CIB4A0PJX0 185 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 NPIPB13A6NJU9 1138 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 OR5H1A6NKK0 313 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 ENO4A6NNW6 628 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 NPIPB4C9JG80 1138 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 RPL36A-HNRNPH2H7BZ11 118 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 KRT33AO76009 404 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 NR2C1P13056 603 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 IGHV1-2P23083 117 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 MS4A2Q01362 244 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 PIN1Q13526 163 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 TAF11Q15544 211 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 WDR88Q6ZMY6 472 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 NANOGNBQ7Z5D8 188 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 EPHX4Q8IUS5 362 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 CCDC36Q8IYA8 594 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 CDK20Q8IZL9 346 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF433Q8N7K0 673 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 ZIC4Q8N9L1 334 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 MAGEE2Q8TD90 523 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 S100PBPQ96BU1 408 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 SGTBQ96EQ0 304 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 PYURFQ96I23 114 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 CADM1Q9BY67 442 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 TMEM5Q9Y2B1 443 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 FREM1Q5H8C1 2179 aa12.19□□□□□ -0.46
PRKCSH-202ENST00000585540 MAST4O15021 2626 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 A0A1W2PRQ8 180 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 J3KTA2 159 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 PLPP3O14495 311 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 TRAF3IP2O43734 574 aaPredicted RBP12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 DNAJC8O75937 253 aaPredicted RBP12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 ATP5HO75947 161 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 OR7A10O76100 309 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF432O94892 652 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 PRSS23O95084 383 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 ADORA3P0DMS8 318 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 YAP1P46937 504 aaKnown RBP12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 SLC9A3P48764 834 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 RASSF2P50749 326 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 CLDN17P56750 224 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 IL1RL1Q01638 556 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 LTBQ06643 244 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 FAPQ12884 760 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 DGCR6Q14129 220 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 TSPO2Q5TGU0 170 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 LCN8Q6JVE9 175 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 NIPAL3Q6P499 406 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 PGM2L1Q6PCE3 622 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 KLHL24Q6TFL4 600 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 RRM2BQ7LG56 351 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 P3H2Q8IVL5 708 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 MUS81Q96NY9 551 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 MOGAT1Q96PD6 335 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 TRIM15Q9C019 465 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 ESRP2Q9H6T0 727 aaKnown RBP12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 MAGIXQ9H6Y5 334 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 MEPEQ9NQ76 525 aaPredicted RBP12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 MGAT4BQ9UQ53 548 aa12.18□□□□□ -0.46
PRKCSH-202ENST00000585540 TCRBV5S2A0A599 114 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF726A6NNF4 738 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 MS4A18H0YCH9 400 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 GSC2O15499 205 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 MGRN1O60291 552 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 CH25HO95992 272 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 WNT11O96014 354 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 SEMG1P04279 462 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 H1F0P07305 194 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 TSPAN19P0C672 248 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 UMPSP11172 480 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 FUT4P22083 530 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 DAP3P51398 398 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 UGT2B15P54855 530 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 POU3F1Q03052 451 aaPredicted RBP12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 TRIM25Q14258 630 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 GK3PQ14409 553 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 PPA1Q15181 289 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 MS4A18Q3C1V0 323 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 HMBOX1Q6NT76 420 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 CCDC121Q6ZUS5 278 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 TSEN54Q7Z6J9 526 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 DHFR2Q86XF0 187 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 CDC20BQ86Y33 519 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 NKAIN4Q8IVV8 208 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 GPR137CQ8N3F9 429 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 FNDC8Q8TC99 324 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 TMEM255BQ8WV15 326 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF775Q96BV0 537 aaPredicted RBP12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 ASB9Q96DX5 294 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 RADILQ96JH8 1075 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 DHRS1Q96LJ7 313 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF347Q96SE7 839 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 LRMDAQ9H2I8 198 aa12.17□□□□□ -0.46
PRKCSH-202ENST00000585540 NBPF19A0A087WUL8 3843 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms