RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 SMNDC1O75940 238 aaKnown RBP eCLIP20.52■□□□□ 0.88
LSM7-203ENST00000585409 AKR7A3O95154 331 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 LYPD3O95274 346 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 HIST1H2ABP04908 130 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 CRYGSP22914 178 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 AGTR1P30556 359 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 KIR2DL2P43627 348 aaPredicted RBP20.52■□□□□ 0.88
LSM7-203ENST00000585409 YAP1P46937 504 aaKnown RBP20.52■□□□□ 0.88
LSM7-203ENST00000585409 SLC16A1P53985 500 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 GUSBP1Q15486 140 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 HIST3H2AQ7L7L0 130 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 GALNT5Q7Z7M9 940 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 ADPRHL1Q8NDY3 354 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 HIST1H2ACQ93077 130 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 TAAR8Q969N4 342 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 STARD4Q96DR4 205 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 PRSS27Q9BQR3 290 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 PTDSS2Q9BVG9 487 aa20.52■□□□□ 0.88
LSM7-203ENST00000585409 CADM1Q9BY67 442 aaKnown RBP20.52■□□□□ 0.88
LSM7-203ENST00000585409 KRCC1Q9NPI7 259 aaPredicted RBP20.52■□□□□ 0.88
LSM7-203ENST00000585409 COL6A5A8TX70 2615 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 FTCDNL1E5RQL4 147 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 hCG_2039718K7EN88 272 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 MT-ND1P03886 318 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 THY1P04216 161 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 H1F0P07305 194 aaKnown RBP20.51■□□□□ 0.87
LSM7-203ENST00000585409 UMPSP11172 480 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 NQO1P15559 274 aaKnown RBP20.51■□□□□ 0.87
LSM7-203ENST00000585409 CD79BP40259 229 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 MS4A2Q01362 244 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 H1FNTQ75WM6 255 aaPredicted RBP20.51■□□□□ 0.87
LSM7-203ENST00000585409 TUSC5Q8IXB3 177 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 CDK20Q8IZL9 346 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 RNF113BQ8IZP6 322 aaKnown RBP20.51■□□□□ 0.87
LSM7-203ENST00000585409 FAM86B1Q8N7N1 296 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 TMEM99Q8N816 258 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 PIK3C3Q8NEB9 887 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 PIK3IP1Q96FE7 263 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 C7orf34Q96L11 122 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 SEPHS2Q99611 448 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 CCL19Q99731 98 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 FKRPQ9H9S5 495 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 IL1RAPQ9NPH3 570 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 PARPBPQ9NWS1 579 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 ZNF226Q9NYT6 803 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 NDUFAF4Q9P032 175 aa20.51■□□□□ 0.87
LSM7-203ENST00000585409 FBN1P35555 2871 aaKnown RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 TRIM64A6NGJ6 449 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 TRIM64BA6NI03 449 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 KPNA4O00629 521 aaPredicted RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 SMAD7O15105 426 aaKnown RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 FZD7O75084 574 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 OR6A2O95222 327 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 GRPRP30550 384 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 CCKARP32238 428 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 VWA1Q6PCB0 445 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 WDR88Q6ZMY6 472 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 TSPYL5Q86VY4 417 aaPredicted RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 ZDHHC21Q8IVQ6 265 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 NKAIN4Q8IVV8 208 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 ACOT11Q8WXI4 607 aaPredicted RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 SGTBQ96EQ0 304 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 PERPQ96FX8 193 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 UBTD1Q9HAC8 227 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 NMNAT1Q9HAN9 279 aaPredicted RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 NANSQ9NR45 359 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 PLSCR4Q9NRQ2 329 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 ZNF229Q9UJW7 825 aa20.5■□□□□ 0.87
LSM7-203ENST00000585409 NOSIPQ9Y314 301 aaKnown RBP20.5■□□□□ 0.87
LSM7-203ENST00000585409 INAFM1C9JVW0 142 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 J3KTA2 159 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 ACOT8O14734 319 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 AKAP8O43823 692 aaKnown RBP20.49■□□□□ 0.87
LSM7-203ENST00000585409 CIB2O75838 187 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 BGLAPP02818 100 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 SEMG1P04279 462 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 LOXP28300 417 aaPredicted RBP20.49■□□□□ 0.87
LSM7-203ENST00000585409 VLDLRP98155 873 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 IL1RL1Q01638 556 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 PMS2P3Q13401 168 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 ZNF474Q6S9Z5 364 aaPredicted RBP20.49■□□□□ 0.87
LSM7-203ENST00000585409 ZNF730Q6ZMV8 503 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 C20orf204Q6ZNR8 217 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 PIWIL3Q7Z3Z3 882 aaKnown RBP20.49■□□□□ 0.87
LSM7-203ENST00000585409 BTLAQ7Z6A9 289 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 GPAT4Q86UL3 456 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 CCDC103Q8IW40 242 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 SPATA3Q8NHX4 192 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 TMEM255BQ8WV15 326 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 GSX2Q9BZM3 304 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 YY1AP1Q9H869 796 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 MRPL39Q9NYK5 338 aaKnown RBP20.49■□□□□ 0.87
LSM7-203ENST00000585409 RHCGQ9UBD6 479 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 POMPQ9Y244 141 aa20.49■□□□□ 0.87
LSM7-203ENST00000585409 A0A1W2PRQ8 180 aa20.48■□□□□ 0.87
LSM7-203ENST00000585409 TCRBV5S2A0A599 114 aa20.48■□□□□ 0.87
LSM7-203ENST00000585409 ZNF716A6NP11 495 aa20.48■□□□□ 0.87
LSM7-203ENST00000585409 M0R082 166 aa20.48■□□□□ 0.87
LSM7-203ENST00000585409 CH25HO95992 272 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms