RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 Q6ZSR6 202 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KCTD20Q7Z5Y7 419 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR6V1Q8N148 313 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 BCORP1Q8N888 145 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF511Q8NB15 262 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC37A2Q8TED4 501 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HAVCR1Q96D42 359 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 Q96M85 177 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DCAF16Q9NXF7 216 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 UBQLN2Q9UHD9 624 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FBXL3Q9UKT7 428 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 A0A087WV48 116 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CTNSO60931 367 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KHDRBS3O75525 346 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SERPINI2O75830 405 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TACSTD2P09758 323 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ST6GAL1P15907 406 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 P2RX1P51575 399 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC25A1P53007 311 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IGLV3-21P80748 117 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF267Q14586 743 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 Q499Y3 187 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC16A9Q7RTY1 509 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FAM122BQ7Z309 247 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OOSP2Q86WS3 158 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C1orf216Q8TAB5 229 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MIB2Q96AX9 1013 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NOX3Q9HBY0 568 aa12.95□□□□□ -0.34
CDK5RAP3-237ENST00000585163 A0A0A6YYC8 382 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR5K3A6NET4 321 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 I3L1I5 382 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ARPC1BO15143 372 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 UPK3AO75631 287 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CDC123O75794 336 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RNH1P13489 461 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CPN1P15169 458 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MNDAP41218 407 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TFF2Q03403 129 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM31Q5JXX7 168 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GLDNQ6ZMI3 551 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF761Q86XN6 746 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SPICQ8N5J4 248 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 EXD3Q8N9H8 876 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 UXS1Q8NBZ7 420 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C16orf52Q8NHV5 167 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PIGKQ92643 395 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GPR174Q9BXC1 333 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TCEAL2Q9H3H9 227 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NARFLQ9H6Q4 476 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HCN3Q9P1Z3 774 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HIF3AQ9Y2N7 669 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR10H1Q9Y4A9 318 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CLDN16Q9Y5I7 305 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KIR2DS5A0A0G2JLQ3 304 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 A0A0G2JNG1 304 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM72A0PK05 275 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C4orf47A7E2U8 309 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 BLOC1S5-TXNDC5H3BN57 136 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KIR2DS3K7RE56 304 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RPP14O95059 124 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CFDP00746 253 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IGF2P01344 180 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TNFP01375 233 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IFNA16P05015 189 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 APEHP13798 732 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PRKACBP22694 351 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CDK2P24941 298 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 AKT2P31751 481 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 AQP2P41181 271 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ART1P52961 327 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RIPPLY1Q0D2K3 151 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KIR2DS5Q14953 304 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LIPNQ5VXI9 398 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FBXO46Q6PJ61 603 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KIAA1324Q6UXG2 1013 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IDO2Q6ZQW0 420 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CEP76Q8TAP6 659 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NSMAFQ92636 917 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TSSK2Q96PF2 358 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CCNL2Q96S94 520 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 UTP23Q9BRU9 249 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLITRK2Q9H156 845 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SEMA6CQ9H3T2 930 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TCF7L1Q9HCS4 588 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TAS2R10Q9NYW0 307 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FRRS1LQ9P0K9 344 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MRM2Q9UI43 246 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF346Q9UL40 294 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MOKQ9UQ07 419 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KLHDC2Q9Y2U9 406 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NOSIPQ9Y314 301 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ETV7Q9Y603 341 aa12.94□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR5K4A6NMS3 321 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms