RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PNPP00491 289 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 KRT16P08779 473 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 SAGP10523 405 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 IDH2P48735 452 aaKnown RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 P2RY4P51582 365 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 UBE2NP61088 152 aaKnown RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 HBA1P69905 142 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 FUT5Q11128 374 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 KLF10Q13118 480 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 OTUD3Q5T2D3 398 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 TYW3Q6IPR3 259 aaKnown RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 PAQR6Q6TCH4 344 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 R3HCC1LQ7Z5L2 792 aaKnown RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 DDIASQ8IXT1 998 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 KRTCAP2Q8N6L1 136 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 CNOT9Q92600 299 aaKnown RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 NAA11Q9BSU3 229 aaPredicted RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 SUCNR1Q9BXA5 334 aa15.54■□□□□ 0.08
TOP3A-220ENST00000585031 MRPL37Q9BZE1 423 aaKnown RBP15.54■□□□□ 0.08
TOP3A-220ENST00000585031 NCR1O76036 304 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 ERCC1P07992 297 aaPredicted RBP15.53■□□□□ 0.08
TOP3A-220ENST00000585031 MATN1P21941 496 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 STX1BP61266 288 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 MXRA7P84157 204 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 PTGR1Q14914 329 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 MAPRE2Q15555 327 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 UGT3A2Q3SY77 523 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 C6orf120Q7Z4R8 191 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 TREML1Q86YW5 311 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 TEX29Q8N6K0 151 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 FAM169BQ8N8A8 192 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 OR51F2Q8NH61 342 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 MAGEE2Q8TD90 523 aaPredicted RBP15.53■□□□□ 0.08
TOP3A-220ENST00000585031 C22orf15Q8WYQ4 148 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 TAF15Q92804 592 aaKnown RBP eCLIP15.53■□□□□ 0.08
TOP3A-220ENST00000585031 COQ8BQ96D53 544 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 ANKRD27Q96NW4 1050 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 BTBD10Q9BSF8 475 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 ZNF275Q9NSD4 429 aaPredicted RBP15.53■□□□□ 0.08
TOP3A-220ENST00000585031 PPIAL4AQ9Y536 164 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 DNAJC15Q9Y5T4 150 aa15.53■□□□□ 0.08
TOP3A-220ENST00000585031 TRAV20A0A0B4J274 112 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 PRAMEF27A3QJZ7 478 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 PIP5K1BO14986 540 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 UBDO15205 165 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 GYG2O15488 501 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 TFP02787 698 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 CBR1P16152 277 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 FKBP2P26885 142 aaKnown RBP15.52■□□□□ 0.08
TOP3A-220ENST00000585031 TACR3P29371 465 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 ATP4BP51164 291 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 CEACAM7Q14002 265 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 DNAL1Q4LDG9 190 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 KRT80Q6KB66 452 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 C1QL2Q7Z5L3 287 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 LRP11Q86VZ4 500 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 RNF217Q8TC41 542 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 SLC7A6OSQ96CW6 309 aaPredicted RBP15.52■□□□□ 0.08
TOP3A-220ENST00000585031 ZNF837Q96EG3 531 aaPredicted RBP15.52■□□□□ 0.08
TOP3A-220ENST00000585031 NOX3Q9HBY0 568 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 MYEF2Q9P2K5 600 aaKnown RBP15.52■□□□□ 0.08
TOP3A-220ENST00000585031 REV1Q9UBZ9 1251 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 PCDHGB4Q9UN71 923 aa15.52■□□□□ 0.08
TOP3A-220ENST00000585031 KMT2CQ8NEZ4 4911 aaKnown RBP15.51■□□□□ 0.07
TOP3A-220ENST00000585031 LIPT2A6NK58 231 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 AQP7P3A6NL99 342 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 B2RBV5 119 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 ZNF587BE7ETH6 402 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 ZNF208O43345 1280 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 RP2O75695 350 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 KRT33AO76009 404 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 C1QCP02747 245 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 LBPP18428 481 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 ZFP36P26651 326 aaKnown RBP15.51■□□□□ 0.07
TOP3A-220ENST00000585031 HPCAL1P37235 193 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 ALDH3B1P43353 468 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 ARF1P84077 181 aaKnown RBP15.51■□□□□ 0.07
TOP3A-220ENST00000585031 SNTB2Q13425 540 aaKnown RBP15.51■□□□□ 0.07
TOP3A-220ENST00000585031 MAD2L1BPQ15013 274 aaPredicted RBP15.51■□□□□ 0.07
TOP3A-220ENST00000585031 FRRS1Q6ZNA5 592 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 RNF165Q6ZSG1 346 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 CREB3L2Q70SY1 520 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 GPAT4Q86UL3 456 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 EPHX4Q8IUS5 362 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 CLECL1Q8IZS7 167 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 MCUR1Q96AQ8 359 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 SF3B5Q9BWJ5 86 aaKnown RBP15.51■□□□□ 0.07
TOP3A-220ENST00000585031 ZNF385DQ9H6B1 395 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 SLC35A3Q9Y2D2 325 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 TMED5Q9Y3A6 229 aa15.51■□□□□ 0.07
TOP3A-220ENST00000585031 PLPP2O43688 288 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 SYNGR3O43761 229 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 OR12D1P0DN82 309 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 COX4I1P13073 169 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 ACHEP22303 614 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 PAX7P23759 505 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 POLR2HP52434 150 aaKnown RBP15.5■□□□□ 0.07
TOP3A-220ENST00000585031 KCNJ10P78508 379 aa15.5■□□□□ 0.07
TOP3A-220ENST00000585031 POU3F1Q03052 451 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-220ENST00000585031 NPRL3Q12980 569 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms