RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 DKKL1Q9UK85 242 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 FBXL4Q9UKA2 621 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 MOKQ9UQ07 419 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 POLHQ9Y253 713 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 HIF3AQ9Y2N7 669 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 CORINQ9Y5Q5 1042 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 IGKV1D-42A0A075B6H8 117 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 A0A087WZY1 265 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 TEX13CA0A0J9YWL9 993 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 TMEM200CA6NKL6 621 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 C12orf71A8MTZ7 269 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 NPIPA5E9PKD4 350 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 J3QLW9 94 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ZNF208O43345 1280 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 SNX4O95219 450 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 BGLAPP02818 100 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ASAH2BP0C7U1 165 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 PRKAR1AP10644 381 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 CPEP16870 476 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ZNF19P17023 458 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 PRKCAP17252 672 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 GRPRP30550 384 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 IDUAP35475 653 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ACVR1BP36896 505 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 TGFBR2P37173 567 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 GBX2P52951 348 aaPredicted RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 MLF1P58340 268 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 NCS1P62166 190 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 RPS18P62269 152 aaKnown RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 ACTA2P62736 377 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ACTG2P63267 376 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 RUNX1T1Q06455 604 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 DCTN2Q13561 401 aaKnown RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 IL10RAQ13651 578 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 LY6DQ14210 128 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 GALEQ14376 348 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 OR7A5Q15622 319 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 SGCBQ16585 318 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 TBR1Q16650 682 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 MOGQ16653 247 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ZNF791Q3KP31 576 aaPredicted RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 GXYLT1Q4G148 440 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 OR2G6Q5TZ20 316 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 LIPKQ5VXJ0 399 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 PLCZ1Q86YW0 608 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 CROCCP3Q8IVE0 287 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 GHDCQ8N2G8 530 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 OR1J4Q8NGS1 313 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 OR2T4Q8NH00 348 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 MCFD2Q8NI22 146 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 NDNFQ8TB73 568 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 SNX33Q8WV41 574 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 PTP4A1Q93096 173 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ZMYND19Q96E35 227 aaPredicted RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 SGCZQ96LD1 299 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 Q96M85 177 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 OPALINQ96PE5 141 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 GPX7Q96SL4 187 aaPredicted RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 NMNAT3Q96T66 252 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 MESP1Q9BRJ9 268 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ALG8Q9BVK2 526 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 RTN4RQ9BZR6 473 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 OR51E2Q9H255 320 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 SRA1Q9HD15 236 aaKnown RBP8.4□□□□□ -1.06
SS18-220ENST00000582092 HMG20AQ9NP66 347 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 TRIM36Q9NQ86 728 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 P4HTMQ9NXG6 502 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 HAO2Q9NYQ3 351 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 NPIPA1Q9UND3 350 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 ADAM18Q9Y3Q7 739 aa8.4□□□□□ -1.06
SS18-220ENST00000582092 FER1L5A0AVI2 2057 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 PNMA8CA0A1B0GUJ8 204 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 ZC3H12DA2A288 527 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 A6NIZ1 184 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 ZNF670-ZNF695F2Z2N8 137 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 NKX2-8O15522 239 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 ARHGEF9O43307 516 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 GLCEO94923 617 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 HLA-DQA2P01906 255 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 HLA-DPB1P04440 258 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 SERPINA7P05543 415 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 GYPBP06028 91 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 CELA2AP08217 269 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 TACSTD2P09758 323 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 SBK2P0C263 348 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 OR2T7P0C7T2 308 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 TCEA1P23193 301 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 DIO1P49895 249 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 BLVRAP53004 296 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 SLC25A1P53007 311 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 OR2B6P58173 313 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 RAP1BP61224 184 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 RPS3AP61247 264 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 RPL27P61353 136 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 RPS4XP62701 263 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 RAP1AP62834 184 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 OC90Q02509 493 aaPredicted RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 EGR4Q05215 589 aa8.39□□□□□ -1.07
SS18-220ENST00000582092 KRR1Q13601 381 aaKnown RBP8.39□□□□□ -1.07
SS18-220ENST00000582092 TRAM1Q15629 374 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms