RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 LRRN3E7EW58 273 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 SLC43A1O75387 559 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 LYPD3O95274 346 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 IFNA14P01570 189 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 THY1P04216 161 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 DANCRP0C864 163 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 CDH11P55287 796 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 SLC25A3Q00325 362 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 PMS2P3Q13401 168 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 HIKESHIQ53FT3 197 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 HMBOX1Q6NT76 420 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 SLC22A25Q6T423 547 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 LINGO2Q7L985 606 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 TSPYL5Q86VY4 417 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-220ENST00000581707 UEVLDQ8IX04 471 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 MRPL39Q9NYK5 338 aaKnown RBP17.08■□□□□ 0.32
SREBF1-220ENST00000581707 BAG5Q9UL15 447 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 SLC7A7Q9UM01 511 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 SH3GLB1Q9Y371 365 aa17.08■□□□□ 0.32
SREBF1-220ENST00000581707 FAM220BPB1ANY3 271 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 OVOL3O00110 214 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 TRAF3IP2O43734 574 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-220ENST00000581707 AKAP8O43823 692 aaKnown RBP17.07■□□□□ 0.32
SREBF1-220ENST00000581707 WNT11O96014 354 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 HPRP00739 348 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 COX4I1P13073 169 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 ATP5J2P56134 94 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 ROR2Q01974 943 aaKnown RBP17.07■□□□□ 0.32
SREBF1-220ENST00000581707 PGGHGQ32M88 737 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 TTC33Q6PID6 262 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-220ENST00000581707 WDR88Q6ZMY6 472 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 CARM1Q86X55 608 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 DEPDC4Q8N2C3 294 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 OR2T12Q8NG77 320 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 OR1K1Q8NGR3 316 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 MPP4Q96JB8 637 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 Q96MF0 132 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 OR2M2Q96R28 347 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 AP3M1Q9Y2T2 418 aa17.07■□□□□ 0.32
SREBF1-220ENST00000581707 NF1P21359 2839 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 PLPP3O14495 311 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 MT-ATP6P00846 226 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 HLA-DOBP13765 273 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 RIPPLY3P57055 190 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 PUDPQ08623 228 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 SPOCK1Q08629 439 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 TBRG1Q3YBR2 411 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 GPR137CQ8N3F9 429 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 PIK3C3Q8NEB9 887 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 ANKK1Q8NFD2 765 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 BCL2L2Q92843 193 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-220ENST00000581707 GTPBP3Q969Y2 492 aaKnown RBP17.06■□□□□ 0.32
SREBF1-220ENST00000581707 C18orf12Q96KH6 178 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 ELAC2Q9BQ52 826 aaKnown RBP17.06■□□□□ 0.32
SREBF1-220ENST00000581707 OBP2BQ9NPH6 170 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 FAIMQ9NVQ4 179 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 POU2F3Q9UKI9 436 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 NOX1Q9Y5S8 564 aa17.06■□□□□ 0.32
SREBF1-220ENST00000581707 ZFHX3Q15911 3703 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 NIPBLQ6KC79 2804 aaeCLIP17.05■□□□□ 0.32
SREBF1-220ENST00000581707 RPL36A-HNRNPH2H7BZ11 118 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 TNFRSF1BP20333 461 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 AHCYP23526 432 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 KDELR2P33947 212 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 SH3BGRP55822 239 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-220ENST00000581707 UBE2NP61088 152 aaKnown RBP17.05■□□□□ 0.32
SREBF1-220ENST00000581707 POU3F1Q03052 451 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-220ENST00000581707 ANKRD16Q6P6B7 361 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 ARPINQ7Z6K5 226 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 MICU2Q8IYU8 434 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 TMEM123Q8N131 208 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 OR5J2Q8NH18 312 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 TRMT61AQ96FX7 289 aaKnown RBP17.05■□□□□ 0.32
SREBF1-220ENST00000581707 ALG2Q9H553 416 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 EFCAB1Q9HAE3 211 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 GPR35Q9HC97 309 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 CMTM6Q9NX76 183 aa17.05■□□□□ 0.32
SREBF1-220ENST00000581707 A0A096LPE4 126 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 A0A1W2PPZ6 126 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 ELOVL7A1L3X0 281 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 E7EQL1 145 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 SHOX2O60902 331 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-220ENST00000581707 OR6A2O95222 327 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 CH25HO95992 272 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 CD8AP01732 235 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 INHBBP09529 407 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 SEC24CP53992 1094 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 ARF1P84077 181 aaKnown RBP17.04■□□□□ 0.32
SREBF1-220ENST00000581707 ZNF74Q16587 644 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 LRRC23Q53EV4 343 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-220ENST00000581707 CYBRD1Q53TN4 286 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 NHLRC1Q6VVB1 395 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 PXKQ7Z7A4 578 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 DTX2Q86UW9 622 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 TREML1Q86YW5 311 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 SLC15A3Q8IY34 581 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 MAGEE2Q8TD90 523 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-220ENST00000581707 TXNDC15Q96J42 360 aa17.04■□□□□ 0.32
SREBF1-220ENST00000581707 PRSS27Q9BQR3 290 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms