RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 RASD1Q9Y272 281 aa18.33■□□□□ 0.52
CCDC42-203ENST00000581598 B3GALT5Q9Y2C3 310 aa18.33■□□□□ 0.52
CCDC42-203ENST00000581598 ABCA1O95477 2261 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 OR6C65A6NJZ3 312 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 FAM220BPB1ANY3 271 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 FTCDNL1E5RQL4 147 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 RNF223E7ERA6 249 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 M0R1B8 84 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 PAX7P23759 505 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 PRKAR1BP31321 381 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 SPOCK1Q08629 439 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 ADRM1Q16186 407 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 FXNQ16595 210 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 LSRQ86X29 649 aaPredicted RBP18.32■□□□□ 0.52
CCDC42-203ENST00000581598 PTOV1Q86YD1 416 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 TMEM38AQ9H6F2 299 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 OBP2BQ9NPH6 170 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 ADPRHL2Q9NX46 363 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 GDF2Q9UK05 429 aaPredicted RBP18.32■□□□□ 0.52
CCDC42-203ENST00000581598 POU2F3Q9UKI9 436 aa18.32■□□□□ 0.52
CCDC42-203ENST00000581598 INAFM1C9JVW0 142 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 NDUFS7O75251 213 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 AHSA1O95433 338 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 WNT11O96014 354 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 PRPS1P60891 318 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 GCNT6Q5T4J0 391 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 C9orf135Q5VTT2 229 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 B3GLCTQ6Y288 498 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 CREB3L2Q70SY1 520 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 GPAT4Q86UL3 456 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 FBXL14Q8N1E6 418 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 MUC15Q8N387 334 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 LSMEM1Q8N8F7 131 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 MAL2Q969L2 176 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 MCUR1Q96AQ8 359 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 CLPTM1LQ96KA5 538 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 ADAD1Q96M93 576 aaKnown RBP18.31■□□□□ 0.52
CCDC42-203ENST00000581598 FKRPQ9H9S5 495 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 GMPR2Q9P2T1 348 aaKnown RBP18.31■□□□□ 0.52
CCDC42-203ENST00000581598 ALPK2Q86TB3 2170 aa18.31■□□□□ 0.52
CCDC42-203ENST00000581598 C5orf58C9J3I9 102 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 ARAFP10398 606 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 EGR4Q05215 589 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 RBBP4Q09028 425 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 CYP51A1Q16850 503 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 DHRS4L2Q6PKH6 230 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 C5orf46Q6UWT4 87 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
CCDC42-203ENST00000581598 OR2T12Q8NG77 320 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 UTP4Q969X6 686 aaKnown RBP18.3■□□□□ 0.52
CCDC42-203ENST00000581598 PTDSS2Q9BVG9 487 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 CACNG6Q9BXT2 260 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 USP22Q9UPT9 525 aa18.3■□□□□ 0.52
CCDC42-203ENST00000581598 CHD3Q12873 2000 aaKnown RBP18.29■□□□□ 0.52
CCDC42-203ENST00000581598 PDE5AO76074 875 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 PCGF2P35227 344 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 FABP6P51161 128 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 DMTNQ08495 405 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 REEP3Q6NUK4 255 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 ERICH5Q6P6B1 374 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 KLHL24Q6TFL4 600 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 PRIMA1Q86XR5 153 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 EPHX4Q8IUS5 362 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 MICU2Q8IYU8 434 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 RNF148Q8N7C7 305 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 KCTD14Q9BQ13 255 aaPredicted RBP18.29■□□□□ 0.52
CCDC42-203ENST00000581598 SPATA5L1Q9BVQ7 753 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 C1QTNF6Q9BXI9 259 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 RSPO3Q9BXY4 272 aaPredicted RBP18.29■□□□□ 0.52
CCDC42-203ENST00000581598 LINC00470Q9BZP3 86 aa18.29■□□□□ 0.52
CCDC42-203ENST00000581598 ELOA3DA6NLF2 546 aaPredicted RBP18.28■□□□□ 0.52
CCDC42-203ENST00000581598 ZNF587BE7ETH6 402 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 H7C417 338 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 OR2T1O43869 369 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 PNMTP11086 282 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 SELENOPP49908 381 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 DSCR9P59020 149 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 CDK6Q00534 326 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 VMACQ2NL98 169 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 ELOA3BQ3SY89 546 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 KRT73Q86Y46 540 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 C11orf65Q8NCR3 313 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 ANKK1Q8NFD2 765 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 ELOA3Q8NG57 546 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 OR1K1Q8NGR3 316 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 NFKBIDQ8NI38 313 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 MAGEE2Q8TD90 523 aaPredicted RBP18.28■□□□□ 0.52
CCDC42-203ENST00000581598 RPS6KB2Q9UBS0 482 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 RCE1Q9Y256 329 aa18.28■□□□□ 0.52
CCDC42-203ENST00000581598 SONP18583 2426 aaKnown RBP18.27■□□□□ 0.52
CCDC42-203ENST00000581598 ELOVL7A1L3X0 281 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 CRLF1O75462 422 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 KRT33AO76009 404 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 PTNP21246 168 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 APOBEC3AP31941 199 aaPredicted RBP18.27■□□□□ 0.52
CCDC42-203ENST00000581598 RPS5P46782 204 aaKnown RBP18.27■□□□□ 0.52
CCDC42-203ENST00000581598 HOXC5Q00444 222 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 C3orf36Q3SXR2 165 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 TBRG1Q3YBR2 411 aa18.27■□□□□ 0.52
CCDC42-203ENST00000581598 NIPAL3Q6P499 406 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms