RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 LRRC17Q8N6Y2 441 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 LIPHQ8WWY8 451 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 NRGNQ92686 78 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 LINC00470Q9BZP3 86 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 NANSQ9NR45 359 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 MAN2C1Q9NTJ4 1040 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 MAGEL2Q9UJ55 1249 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 ZNF229Q9UJW7 825 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 SAMD4AQ9UPU9 718 aaKnown RBP17.01■□□□□ 0.31
SS18-208ENST00000577751 NOX1Q9Y5S8 564 aa17.01■□□□□ 0.31
SS18-208ENST00000577751 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17■□□□□ 0.31
SS18-208ENST00000577751 OR5H1A6NKK0 313 aa17■□□□□ 0.31
SS18-208ENST00000577751 ENO4A6NNW6 628 aa17■□□□□ 0.31
SS18-208ENST00000577751 MPGP29372 298 aa17■□□□□ 0.31
SS18-208ENST00000577751 IFNA8P32881 189 aa17■□□□□ 0.31
SS18-208ENST00000577751 MSX2P35548 267 aaPredicted RBP17■□□□□ 0.31
SS18-208ENST00000577751 SSX8Q7RTT4 187 aa17■□□□□ 0.31
SS18-208ENST00000577751 CDH24Q86UP0 819 aa17■□□□□ 0.31
SS18-208ENST00000577751 UEVLDQ8IX04 471 aa17■□□□□ 0.31
SS18-208ENST00000577751 PFN4Q8NHR9 129 aa17■□□□□ 0.31
SS18-208ENST00000577751 PIK3IP1Q96FE7 263 aa17■□□□□ 0.31
SS18-208ENST00000577751 BOD1Q96IK1 185 aa17■□□□□ 0.31
SS18-208ENST00000577751 LIME1Q9H400 295 aa17■□□□□ 0.31
SS18-208ENST00000577751 TAS2R5Q9NYW4 299 aa17■□□□□ 0.31
SS18-208ENST00000577751 ENPP4Q9Y6X5 453 aa17■□□□□ 0.31
SS18-208ENST00000577751 POLQO75417 2590 aa17■□□□□ 0.31
SS18-208ENST00000577751 CIB4A0PJX0 185 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 UPK3AO75631 287 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 RAD51DO75771 328 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 ADORA3P0DMS8 318 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 LGALS3BPQ08380 585 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 OR7E24Q6IFN5 339 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 RINLQ6ZS11 566 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 LINGO2Q7L985 606 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 TRPM8Q7Z2W7 1104 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 ABHD12BQ7Z5M8 362 aaPredicted RBP16.99■□□□□ 0.31
SS18-208ENST00000577751 ARHGAP24Q8N264 748 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 FAM86B1Q8N7N1 296 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 C1orf162Q8NEQ5 155 aaPredicted RBP16.99■□□□□ 0.31
SS18-208ENST00000577751 C7orf34Q96L11 122 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 HS3ST6Q96QI5 342 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 OR2M2Q96R28 347 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 FNDC11Q9BVV2 318 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 C1orf21Q9H246 121 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 C20orf141Q9NUB4 165 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 MED31Q9Y3C7 131 aa16.99■□□□□ 0.31
SS18-208ENST00000577751 SPG11Q96JI7 2443 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 HTR3EA5X5Y0 456 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 ARPC2O15144 300 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 AKAP8O43823 692 aaKnown RBP16.98■□□□□ 0.31
SS18-208ENST00000577751 OR7A10O76100 309 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 TSPAN19P0C672 248 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 FUT1P19526 365 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 AHCYP23526 432 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 NR1H2P55055 460 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 IL1RL1Q01638 556 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 POU3F1Q03052 451 aaPredicted RBP16.98■□□□□ 0.31
SS18-208ENST00000577751 TRAM2Q15035 370 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 PPA1Q15181 289 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 STK11Q15831 433 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 IQCCQ4KMZ1 466 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 TMEM123Q8N131 208 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 C17orf78Q8N4C9 275 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 ANKK1Q8NFD2 765 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 MUCL1Q96DR8 90 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 SGTBQ96EQ0 304 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 PYURFQ96I23 114 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 TMEM204Q9BSN7 226 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 TAS2R1Q9NYW7 299 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 NDUFAF4Q9P032 175 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 RHCGQ9UBD6 479 aa16.98■□□□□ 0.31
SS18-208ENST00000577751 ANKRD17O75179 2603 aaKnown RBP16.97■□□□□ 0.31
SS18-208ENST00000577751 RPL36A-HNRNPH2H7BZ11 118 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 SLC43A1O75387 559 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 OR6A2O95222 327 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 SEMG1P04279 462 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 HIST1H2ABP04908 130 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 LSM11P83369 360 aaKnown RBP eCLIP16.97■□□□□ 0.31
SS18-208ENST00000577751 TGFBR3Q03167 851 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 C1QTNF12Q5T7M4 302 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 C9orf135Q5VTT2 229 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 HIST3H2AQ7L7L0 130 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 WDR31Q8NA23 367 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 PIK3C3Q8NEB9 887 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 NINJ1Q92982 152 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 HIST1H2ACQ93077 130 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 PLPPR2Q96GM1 343 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 TXNDC15Q96J42 360 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 NSMCE2Q96MF7 247 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 ANKRD19PQ9H560 264 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 NMNAT1Q9HAN9 279 aaPredicted RBP16.97■□□□□ 0.31
SS18-208ENST00000577751 NGBQ9NPG2 151 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 MED29Q9NX70 200 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 ST6GALNAC2Q9UJ37 374 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 SLC25A15Q9Y619 301 aa16.97■□□□□ 0.31
SS18-208ENST00000577751 RAI1Q7Z5J4 1906 aaPredicted RBP16.97■□□□□ 0.31
SS18-208ENST00000577751 ALPK2Q86TB3 2170 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 SLC35F4A4IF30 521 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 ZNF587BE7ETH6 402 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 C11orf98E9PRG8 122 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms