RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GPAT4Q86UL3 456 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 WFDC8Q8IUA0 241 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 KBTBD8Q8NFY9 601 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 OR1K1Q8NGR3 316 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 RASSF5Q8WWW0 418 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 SLC25A36Q96CQ1 311 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 NMD3Q96D46 503 aaKnown RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 PLPPR2Q96GM1 343 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 MPP4Q96JB8 637 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 HSH2DQ96JZ2 352 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 DHRS1Q96LJ7 313 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 PRRC1Q96M27 445 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 ZNF75AQ96N20 296 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 ALPK1Q96QP1 1244 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 CCT8L2Q96SF2 557 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 NAA11Q9BSU3 229 aaPredicted RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 SLC19A3Q9BZV2 496 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 POLR2J2Q9GZM3 115 aaKnown RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 NSRP1Q9H0G5 558 aaKnown RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 POLR2J3Q9H1A7 115 aaKnown RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 SEC61A2Q9H9S3 476 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 FKRPQ9H9S5 495 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 EFCAB1Q9HAE3 211 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 NOX3Q9HBY0 568 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 SPAG4Q9NPE6 437 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 SLC17A5Q9NRA2 495 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 ASB6Q9NWX5 421 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 MED29Q9NX70 200 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 ZNF226Q9NYT6 803 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 SH3GLB1Q9Y371 365 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 CORINQ9Y5Q5 1042 aa7.6□□□□□ -1.19
SMG6-216ENST00000575176 YLPM1P49750 1951 aaKnown RBP7.6□□□□□ -1.19
SMG6-216ENST00000575176 A0A1W2PR80 420 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 ENO4A6NNW6 628 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 OR2T1O43869 369 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 MT-ATP6P00846 226 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 SERPINA1P01009 418 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 PAX1P15863 534 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 ATP6V1B2P21281 511 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 CBLP22681 906 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 IL32P24001 234 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 MPGP29372 298 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 RBM34P42696 430 aaKnown RBP7.59□□□□□ -1.19
SMG6-216ENST00000575176 CLDN17P56750 224 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 FXYD6P3P58550 94 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 NCALDP61601 193 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 VLDLRP98155 873 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 POU3F1Q03052 451 aaPredicted RBP7.59□□□□□ -1.19
SMG6-216ENST00000575176 RUNX1T1Q06455 604 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 PUDPQ08623 228 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 ZP4Q12836 540 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 KRT72Q14CN4 511 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 PPA1Q15181 289 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 PGGHGQ32M88 737 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 HIKESHIQ53FT3 197 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 C9orf135Q5VTT2 229 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 DEF8Q6ZN54 512 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 H1FNTQ75WM6 255 aaPredicted RBP7.59□□□□□ -1.19
SMG6-216ENST00000575176 ZNF100Q8IYN0 542 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 PGAM4Q8N0Y7 254 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 C17orf78Q8N4C9 275 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 RNF148Q8N7C7 305 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 LRRC75AQ8NAA5 344 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 OR5J2Q8NH18 312 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 HSD17B8Q92506 261 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 BCL2L2Q92843 193 aaPredicted RBP7.59□□□□□ -1.19
SMG6-216ENST00000575176 CMTM5Q96DZ9 223 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 TXNDC15Q96J42 360 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 OXGR1Q96P68 337 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 TAPBPLQ9BX59 468 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 HDHD5Q9BXW7 423 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 CACYBPQ9HB71 228 aaKnown RBP7.59□□□□□ -1.19
SMG6-216ENST00000575176 TMEM27Q9HBJ8 222 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 CRNNQ9UBG3 495 aaPredicted RBP7.59□□□□□ -1.19
SMG6-216ENST00000575176 RPS6KB2Q9UBS0 482 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 EGFL7Q9UHF1 273 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 RIMS3Q9UJD0 308 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 ZNF229Q9UJW7 825 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 BAG5Q9UL15 447 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 AP3M1Q9Y2T2 418 aa7.59□□□□□ -1.19
SMG6-216ENST00000575176 FN1P02751 2386 aaKnown RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 ARPC4-TTLL3A0A0A6YYG9 625 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 OVOL3O00110 214 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 KPNA4O00629 521 aaPredicted RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 CDC42EP2O14613 210 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 HS3ST1O14792 307 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 IGLV1-44P01699 117 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 CD8AP01732 235 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 MT-ND1P03886 318 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 SOD3P08294 240 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 PGA4P0DJD7 388 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 PGA3P0DJD8 388 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 THRBP10828 461 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 MAKP20794 623 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 HOXC12P31275 282 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 LIMS1P48059 325 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 ZNF133P52736 654 aaPredicted RBP7.58□□□□□ -1.2
SMG6-216ENST00000575176 ART1P52961 327 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 ACKR1Q16570 336 aa7.58□□□□□ -1.2
SMG6-216ENST00000575176 HIST3H3Q16695 136 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms