RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 P2RY4P51582 365 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 IST1P53990 364 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 CLDN17P56750 224 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 POU3F1Q03052 451 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 RPL18Q07020 188 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 ZP4Q12836 540 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 POU4F3Q15319 338 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 ATP6AP1Q15904 470 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 ANKDD1AQ495B1 522 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 AAED1Q7RTV5 226 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 NUFIP2Q7Z417 695 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 PXKQ7Z7A4 578 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 ZER1Q7Z7L7 766 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 LIX1LQ8IVB5 337 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 OR10G2Q8NGC3 310 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 OR9Q2Q8NGE9 314 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 OR13C2Q8NGS9 318 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 LRTOMTQ8WZ04 291 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 UCK2Q9BZX2 261 aa12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 PDP1Q9P0J1 537 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-218ENST00000574964 A0A1W2PRG6 482 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 HPRP00739 348 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 POU2F1P14859 743 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 PRPS1P60891 318 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 GUSBP1Q15486 140 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 ZBED5Q49AG3 693 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 ALG10Q5BKT4 473 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 PGBD2Q6P3X8 592 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 CREB3L2Q70SY1 520 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 AMIGO2Q86SJ2 522 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 LUZP2Q86TE4 346 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 EPHX4Q8IUS5 362 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 AQP11Q8NBQ7 271 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 APH1AQ96BI3 265 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 TNFRSF13CQ96RJ3 184 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 INIPQ9NRY2 104 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 MGAT4BQ9UQ53 548 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 HIF3AQ9Y2N7 669 aa12.89□□□□□ -0.35
NPLOC4-218ENST00000574964 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 NKX2-6A6NCS4 301 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ZNF726A6NNF4 738 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 MCIDASD6RGH6 385 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 MSTNO14793 375 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 BAG2O95816 211 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 F13BP05160 661 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 CD8BP10966 210 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 HLA-DOBP13765 273 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ZNF23P17027 643 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 FPR3P25089 353 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 RPL4P36578 427 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ASCL1P50553 236 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 TSPAN31Q12999 210 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 NIPAL3Q6P499 406 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 SLC35D2Q76EJ3 337 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 TMEM179BQ7Z7N9 219 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 HIPK1Q86Z02 1210 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 UBE2J2Q8N2K1 259 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ZNF610Q8N9Z0 462 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 RELL2Q8NC24 303 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ICA1LQ8NDH6 482 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 OR5K1Q8NHB7 308 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 TMEM45BQ96B21 275 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 NRBF2Q96F24 287 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 CENPNQ96H22 339 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 SEMA6AQ9H2E6 1030 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ZNF556Q9HAH1 456 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 KIF17Q9P2E2 1029 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 B3GAT1Q9P2W7 334 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 UPB1Q9UBR1 384 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 ICE1Q9Y2F5 2266 aa12.88□□□□□ -0.35
NPLOC4-218ENST00000574964 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 WIPF3A6NGB9 483 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 KRT33AO76009 404 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 NDUFB2O95178 105 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 BCL10O95999 233 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 GASTP01350 101 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 ANXA8P13928 327 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 IFNGR1P15260 489 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 GSTM3P21266 225 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 UQCRC1P31930 480 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 OR3A2P47893 321 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 CTXN1P60606 82 aa12.87□□□□□ -0.35
NPLOC4-218ENST00000574964 SHQ1Q6PI26 577 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms