RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 EFNB2P52799 333 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 EEF1A1P68104 462 aaKnown RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 PLEKHN1Q494U1 663 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 GAREM2Q75VX8 874 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 NDUFAF7Q7L592 441 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 DMBX1Q8NFW5 382 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 OR2L2Q8NH16 312 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 MOAP1Q96BY2 351 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 PTDSS2Q9BVG9 487 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 KCNK15Q9H427 330 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 SLC23A2Q9UGH3 650 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 TNFSF18Q9UNG2 199 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 MED31Q9Y3C7 131 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 IGKV1-8A0A0C4DH67 115 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 A0A1W2PPV9 198 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 FAM171A2A8MVW0 826 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 LEFTY2O00292 366 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 PEX12O00623 359 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 LYPD3O95274 346 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 CSF1P09603 554 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 HIST1H1TP22492 207 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 ARFIP1P53367 373 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 EPHB3P54753 998 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 HTRA4P83105 476 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 KCNAB1Q14722 419 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 MRPL2Q5T653 305 aaKnown RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 ZNF704Q6ZNC4 412 aaPredicted RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 TMPRSS11FQ6ZWK6 438 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 RNF113BQ8IZP6 322 aaKnown RBP13.19□□□□□ -0.3
SMG6-215ENST00000574501 OR7G2Q8NG99 324 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 OR6K6Q8NGW6 343 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 TREM1Q9NP99 234 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 PRSS16Q9NQE7 514 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 CES1P1Q9UKY3 287 aa13.19□□□□□ -0.3
SMG6-215ENST00000574501 SCN3AQ9NY46 2000 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 PRR32B1ATL7 298 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 XRCC3O43542 346 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 RPN2P04844 631 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 LIPCP11150 499 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 NR0B1P51843 470 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 C11orf87Q6NUJ2 197 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 SLC48A1Q6P1K1 146 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 PARS2Q7L3T8 475 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 ADIPOR2Q86V24 386 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 LINC01555Q8NAE3 123 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 NXPE3Q969Y0 559 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 CPNE2Q96FN4 548 aaPredicted RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 DTD2Q96FN9 168 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 NKX3-1Q99801 234 aaPredicted RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 XKR8Q9H6D3 395 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 GAREM1Q9H706 876 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 MRPS30Q9NP92 439 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 FBXO34Q9NWN3 711 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 IL36AQ9UHA7 158 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 TRAV18A0A075B6X5 111 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 GPRIN2O60269 458 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 EIF1BO60739 113 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 OR2F2O95006 317 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 IFNGP01579 166 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 S100A9P06702 114 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 LAMP2P13473 410 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 BCL6P41182 706 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 EIF1P41567 113 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 PNLIPRP2P54317 469 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 ATP1B3P54709 279 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 OR2F1Q13607 317 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 DUSP5Q16690 384 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 FNDC3BQ53EP0 1204 aaKnown RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 DNM1P46Q6ZS02 220 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 OR1J2Q8NGS2 313 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 TCEAL3Q969E4 200 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 ZNF251Q9BRH9 671 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 PITHD1Q9GZP4 211 aaPredicted RBP13.18□□□□□ -0.3
SMG6-215ENST00000574501 PRDM7Q9NQW5 492 aa13.18□□□□□ -0.3
SMG6-215ENST00000574501 KIAA1549LQ6ZVL6 1849 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 TSPAN11A1L157 253 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 OR2AT4A6NND4 320 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 GNB5O14775 395 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 SCAMP1O15126 338 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 NARSO43776 548 aaKnown RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 PRICKLE3O43900 615 aaPredicted RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 ICOSLGO75144 302 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 CLEC3AO75596 197 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 SNAPINO95295 136 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 LAG3P18627 525 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 OR7A5Q15622 319 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ODF4Q2M2E3 257 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 PRRT3Q5FWE3 981 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 LIN54Q6MZP7 749 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms