RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CASP12Q6UXS9 341 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 CARM1Q86X55 608 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ZDHHC21Q8IVQ6 265 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF611Q8N823 705 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 OR5K1Q8NHB7 308 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 MAGEE2Q8TD90 523 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 FBXW5Q969U6 566 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 APH1AQ96BI3 265 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 MUCL1Q96DR8 90 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ARL5BQ96KC2 179 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 MTHFD2LQ9H903 347 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 VCX3AQ9NNX9 186 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 THUMPD1Q9NXG2 353 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 CALML5Q9NZT1 146 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ING1Q9UK53 422 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 TMED7Q9Y3B3 224 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 CADP27708 2225 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 NAV3Q8IVL0 2385 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 TMEM72A0PK05 275 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 DPPA5A6NC42 116 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 A6NHS1 94 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 FAM171A2A8MVW0 826 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 GPR171O14626 319 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 DNPH1O43598 174 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ADAM11O75078 769 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 MRPL33O75394 65 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 RAD51DO75771 328 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 PRSS23O95084 383 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 GKN3PP0CG01 181 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ITGA2P17301 1181 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 RPS4Y1P22090 263 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 MYF6P23409 242 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 CXCR1P25024 350 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 EDNRAP25101 427 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 TACR3P29371 465 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 SLC1A3P43003 542 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 CLK1P49759 484 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 GZMMP51124 257 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ATP5J2P56134 94 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 COPZ1P61923 177 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 RPS4XP62701 263 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 SLC35A1P78382 337 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 PLAURQ03405 335 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 LTBQ06643 244 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 BSPH1Q075Z2 132 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 RGNQ15493 299 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 KCTD21Q4G0X4 260 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 RPS26P11Q5JNZ5 115 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 NCMAPQ5T1S8 102 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 OTUD3Q5T2D3 398 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 TTC23Q5W5X9 447 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ADAM5Q6NVV9 412 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF836Q6ZNA1 936 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 CBLL1Q75N03 491 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 VRK2Q86Y07 508 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ADGRG3Q86Y34 549 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 CCDC103Q8IW40 242 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF440Q8IYI8 595 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 CADM2Q8N3J6 435 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 OR52P1PQ8NH57 321 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 GTPBP3Q969Y2 492 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 HSH2DQ96JZ2 352 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 TMEM204Q9BSN7 226 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 NAA11Q9BSU3 229 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 ARMC7Q9H6L4 198 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 REEP1Q9H902 201 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 SLC6A13Q9NSD5 602 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 USE1Q9NZ43 259 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 OSGIN1Q9UJX0 560 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 BLOC1S6Q9UL45 172 aa8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 NSD1Q96L73 2696 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-216ENST00000574344 IGKV3D-15A0A087WSY6 115 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 TRIM64A6NGJ6 449 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 TRIM64BA6NI03 449 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF716A6NP11 495 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 PDLIM1O00151 329 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF208O43345 1280 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 EIF1BO60739 113 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 CNOT4O95628 575 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 COX5AP20674 150 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 IGHV1-2P23083 117 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 KDELR2P33947 212 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 IDUAP35475 653 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 MAGEA2P43356 314 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 RPL5P46777 297 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 RPS6KA3P51812 740 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 CDH11P55287 796 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 FAPQ12884 760 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 IL18R1Q13478 541 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 SCARB2Q14108 478 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 LARS2Q15031 903 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 TIMM23BQ5SRD1 257 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 FBXW9Q5XUX1 488 aa8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-216ENST00000574344 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms