RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CLEC2AQ6UVW9 174 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 TSPYL5Q86VY4 417 aaPredicted RBP15.73■□□□□ 0.11
CHD3-214ENST00000572579 GPR32P1Q8NGA4 272 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 TXNDC15Q96J42 360 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 RCE1Q9Y256 329 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 STAB1Q9NY15 2570 aa15.73■□□□□ 0.11
CHD3-214ENST00000572579 TRAV36DV7A0A075B6V5 113 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 LYPD3O95274 346 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 IGKV3-15P01624 115 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 TP53P04637 393 aaPredicted RBP15.72■□□□□ 0.11
CHD3-214ENST00000572579 IGFBP1P08833 259 aaPredicted RBP15.72■□□□□ 0.11
CHD3-214ENST00000572579 SERPINF1P36955 418 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 CDH12P55289 794 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 DSCR9P59020 149 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 NPTX1Q15818 432 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 DUSP7Q16829 419 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 CEACAM16Q2WEN9 425 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 C6orf52Q5T4I8 152 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 HMBOX1Q6NT76 420 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 ULK3Q6PHR2 472 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 KLHL24Q6TFL4 600 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 ABHD12BQ7Z5M8 362 aaPredicted RBP15.72■□□□□ 0.11
CHD3-214ENST00000572579 ANKS4BQ8N8V4 417 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 SMYD1Q8NB12 490 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 OR4D11Q8NGI4 311 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 DNAJA4Q8WW22 397 aaPredicted RBP15.72■□□□□ 0.11
CHD3-214ENST00000572579 FAM168AQ92567 244 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 EMC6Q9BV81 110 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 KATNB1Q9BVA0 655 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 CA10Q9NS85 328 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 RPS6KB2Q9UBS0 482 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 MXRA5Q9NR99 2828 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 RTTNQ86VV8 2226 aa15.72■□□□□ 0.11
CHD3-214ENST00000572579 TMEM129A0AVI4 362 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 OR6C65A6NJZ3 312 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 A8MV72 311 aaPredicted RBP15.71■□□□□ 0.11
CHD3-214ENST00000572579 AIM2O14862 343 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 OR2T1O43869 369 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 SEC14L2O76054 403 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 OR4A8P0C604 315 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 IGHV4-31P0DP07 118 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 CBR1P16152 277 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 VLDLRP98155 873 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 SQLEQ14534 574 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 MSMPQ1L6U9 139 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 C3orf36Q3SXR2 165 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 LINC00114Q6XXX2 140 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 WDR88Q6ZMY6 472 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 CXXC5Q7LFL8 322 aaKnown RBP15.71■□□□□ 0.11
CHD3-214ENST00000572579 NET1Q7Z628 596 aaPredicted RBP15.71■□□□□ 0.11
CHD3-214ENST00000572579 C20orf196Q8IYI0 205 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 FAM169BQ8N8A8 192 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 ANKK1Q8NFD2 765 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 CACYBPQ9HB71 228 aaKnown RBP15.71■□□□□ 0.11
CHD3-214ENST00000572579 NOX3Q9HBY0 568 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 CRLF2Q9HC73 371 aa15.71■□□□□ 0.11
CHD3-214ENST00000572579 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.71■□□□□ 0.11
CHD3-214ENST00000572579 CHD3Q12873 2000 aaKnown RBP15.71■□□□□ 0.11
CHD3-214ENST00000572579 M0R3H8 397 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 SLC43A1O75387 559 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 HOXB1P14653 301 aaPredicted RBP15.7■□□□□ 0.1
CHD3-214ENST00000572579 SLC6A2P23975 617 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 GZMMP51124 257 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 CRYBA2P53672 197 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 UBE2NP61088 152 aaKnown RBP15.7■□□□□ 0.1
CHD3-214ENST00000572579 CHRNB3Q05901 458 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 CARD17Q5XLA6 110 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 FAM91A1Q658Y4 838 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 VHLLQ6RSH7 139 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 RBM45Q8IUH3 476 aaKnown RBP15.7■□□□□ 0.1
CHD3-214ENST00000572579 ADPRHL1Q8NDY3 354 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 OR6S1Q8NH40 331 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 CKAP2Q8WWK9 683 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 SLC47A1Q96FL8 570 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 ZNF75AQ96N20 296 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 FOXN4Q96NZ1 517 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 ZNF317Q96PQ6 595 aaPredicted RBP15.7■□□□□ 0.1
CHD3-214ENST00000572579 ARHGDIGQ99819 225 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 PLK3Q9H4B4 646 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 MED29Q9NX70 200 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 B3GNT2Q9NY97 397 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 PMF1-BGLAPU3KQ54 211 aa15.7■□□□□ 0.1
CHD3-214ENST00000572579 M0QX08 132 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 M0R3G1 203 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 OPN1SWP03999 348 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 SLC25A16P16260 332 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 PPIBP23284 216 aaKnown RBP15.69■□□□□ 0.1
CHD3-214ENST00000572579 THBS4P35443 961 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 RGS8P57771 180 aaPredicted RBP15.69■□□□□ 0.1
CHD3-214ENST00000572579 MTPNP58546 118 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 C1DQ13901 141 aaKnown RBP15.69■□□□□ 0.1
CHD3-214ENST00000572579 EFNB3Q15768 340 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 MDP1Q86V88 176 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 KRT73Q86Y46 540 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 ARMC8Q8IUR7 673 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 ZCCHC24Q8N2G6 241 aaKnown RBP15.69■□□□□ 0.1
CHD3-214ENST00000572579 DPP10Q8N608 796 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 HIPK4Q8NE63 616 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 OR6T1Q8NGN1 323 aa15.69■□□□□ 0.1
CHD3-214ENST00000572579 PROX1Q92786 737 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms