RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 UAP1Q16222 522 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 PNLIPRP3Q17RR3 467 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 HLA-BQ31612 363 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 BEX5Q5H9J7 111 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TECRLQ5HYJ1 363 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 LCN1P1Q5VSP4 162 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 ASPHD2Q6ICH7 369 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CCDC137Q6PK04 289 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 RAD9BQ6WBX8 426 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CDHR3Q6ZTQ4 885 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 NCCRP1Q6ZVX7 275 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 NLRP9Q7RTR0 991 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 ERASQ7Z444 233 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SNX20Q7Z614 316 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 MEX3DQ86XN8 651 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 TGIF2LXQ8IUE1 241 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 C17orf78Q8N4C9 275 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 NPWQ8N729 165 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PQLC3Q8N755 202 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PAPD5Q8NDF8 572 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 OR5D13Q8NGL4 314 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 OR1J2Q8NGS2 313 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 WDR20Q8TBZ3 569 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 M1APQ8TC57 530 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 FANK1Q8TC84 345 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CXorf40AQ8TE69 158 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TFB1MQ8WVM0 346 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 TMEM190Q8WZ59 177 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 GGHQ92820 318 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SLCO2A1Q92959 643 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TADA1Q96BN2 335 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 IMP4Q96G21 291 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 SNF8Q96H20 258 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 CELF6Q96J87 481 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 SFXN2Q96NB2 322 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 VPS35Q96QK1 796 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 KLF6Q99612 283 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 NLNQ9BYT8 704 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 TM6SF2Q9BZW4 377 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 ROPN1BQ9BZX4 212 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 ZDHHC6Q9H6R6 413 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 METTL8Q9H825 291 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 MRPS30Q9NP92 439 aaKnown RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 SLC52A3Q9NQ40 469 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 C20orf96Q9NUD7 363 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 RBM22Q9NW64 420 aaKnown RBP eCLIP3.11□□□□□ -1.91
CDC27-213ENST00000571643 GPATCH2LQ9NWQ4 482 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 SENP1Q9P0U3 644 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 COPS7AQ9UBW8 275 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 KLF2Q9Y5W3 355 aaPredicted RBP3.11□□□□□ -1.91
CDC27-213ENST00000571643 SNX10Q9Y5X0 201 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 PUS1Q9Y606 427 aaKnown RBP eCLIP3.11□□□□□ -1.91
CDC27-213ENST00000571643 GON4LQ3T8J9 2241 aa3.11□□□□□ -1.91
CDC27-213ENST00000571643 FRYLO94915 3013 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 NUMA1Q14980 2115 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 PLXNA2O75051 1894 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 VPS13AQ96RL7 3174 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 SDK1Q7Z5N4 2213 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 CABIN1Q9Y6J0 2220 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 A0A0G2JNG1 304 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 LOC285095A0A1B0GVY8 99 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 A0A1W2PP11 408 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 A0A1W2PRB8 838 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 C1orf226A1L170 272 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 SMCO3A2RU48 225 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 TMEM8BA6NDV4 472 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 C5orf60A6NFR6 353 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 H0YIG0 161 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 TMX2-CTNND1H3BSU7 103 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 KLF11O14901 512 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 RAD51BO15315 384 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 DUX1O43812 170 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 MFSD11O43934 449 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 RPP14O95059 124 aaKnown RBP3.1□□□□□ -1.91
CDC27-213ENST00000571643 CPNE6O95741 557 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 JCHAINP01591 159 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 GP1BAP07359 652 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 CD48P09326 243 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 ANXA4P09525 319 aaPredicted RBP3.1□□□□□ -1.91
CDC27-213ENST00000571643 CD59P13987 128 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 CD22P20273 847 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 TUBG1P23258 451 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 IL32P24001 234 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 ACKR3P25106 362 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 PRDX2P32119 198 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 HMGCLP35914 325 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 CBX5P45973 191 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 SLC6A8P48029 635 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 CTSCP53634 463 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 GEMP55040 296 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 MTCP1P56278 107 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 PRPS1P60891 318 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 RAB14P61106 215 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 POLR2GP62487 172 aaKnown RBP eCLIP3.1□□□□□ -1.91
CDC27-213ENST00000571643 GNB1P62873 340 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 CDK16Q00536 496 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 FUT7Q11130 342 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 ILF2Q12905 390 aaKnown RBP3.1□□□□□ -1.91
CDC27-213ENST00000571643 PRPSAP1Q14558 356 aa3.1□□□□□ -1.91
CDC27-213ENST00000571643 KIR2DS5Q14953 304 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms