RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 NQO1P15559 274 aaKnown RBP17.76■□□□□ 0.43
CLK3-225ENST00000569063 PAX7P23759 505 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 HIKESHIQ53FT3 197 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 KLHL24Q6TFL4 600 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 WDR88Q6ZMY6 472 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 BIVMQ86UB2 503 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 TSPYL5Q86VY4 417 aaPredicted RBP17.76■□□□□ 0.43
CLK3-225ENST00000569063 RP9Q8TA86 221 aaKnown RBP17.76■□□□□ 0.43
CLK3-225ENST00000569063 BCL2L2Q92843 193 aaPredicted RBP17.76■□□□□ 0.43
CLK3-225ENST00000569063 BDH2Q9BUT1 245 aa17.76■□□□□ 0.43
CLK3-225ENST00000569063 HPRP00739 348 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 CD8AP01732 235 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 INHBBP09529 407 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 SH3BGRP55822 239 aaPredicted RBP17.75■□□□□ 0.43
CLK3-225ENST00000569063 ATP5J2P56134 94 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 IL1RL1Q01638 556 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 ROR2Q01974 943 aaKnown RBP17.75■□□□□ 0.43
CLK3-225ENST00000569063 SPOCK1Q08629 439 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 PMS2P3Q13401 168 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 TBRG1Q3YBR2 411 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 HMBOX1Q6NT76 420 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 SLC22A25Q6T423 547 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 NHLRC1Q6VVB1 395 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 DTX2Q86UW9 622 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 UEVLDQ8IX04 471 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 TMEM123Q8N131 208 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 DEPDC4Q8N2C3 294 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 C10orf53Q8N6V4 93 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 MAGEE2Q8TD90 523 aaPredicted RBP17.75■□□□□ 0.43
CLK3-225ENST00000569063 PROX1Q92786 737 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 MPP4Q96JB8 637 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 OR2M2Q96R28 347 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 ZNF426Q9BUY5 554 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 TRAF4Q9BUZ4 470 aaPredicted RBP17.75■□□□□ 0.43
CLK3-225ENST00000569063 GSX1Q9H4S2 264 aaPredicted RBP17.75■□□□□ 0.43
CLK3-225ENST00000569063 BAG5Q9UL15 447 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 SLC7A7Q9UM01 511 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 USP22Q9UPT9 525 aa17.75■□□□□ 0.43
CLK3-225ENST00000569063 FAM220BPB1ANY3 271 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 E7EQL1 145 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 PLPP3O14495 311 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 AKAP8O43823 692 aaKnown RBP17.74■□□□□ 0.43
CLK3-225ENST00000569063 CCDC22O60826 627 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 IFNA14P01570 189 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 HLA-DOBP13765 273 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 HOXB1P14653 301 aaPredicted RBP17.74■□□□□ 0.43
CLK3-225ENST00000569063 PTNP21246 168 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 PUDPQ08623 228 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 ANKRD16Q6P6B7 361 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 TTC33Q6PID6 262 aaPredicted RBP17.74■□□□□ 0.43
CLK3-225ENST00000569063 PXKQ7Z7A4 578 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 GPR137CQ8N3F9 429 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 PIK3C3Q8NEB9 887 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 RCN3Q96D15 328 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 TRMT61AQ96FX7 289 aaKnown RBP17.74■□□□□ 0.43
CLK3-225ENST00000569063 DHRS9Q9BPW9 319 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 SLC19A3Q9BZV2 496 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 GPR35Q9HC97 309 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 POU2F3Q9UKI9 436 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 AP3M1Q9Y2T2 418 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 SH3GLB1Q9Y371 365 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 NOX1Q9Y5S8 564 aa17.74■□□□□ 0.43
CLK3-225ENST00000569063 ARID1AO14497 2285 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 ARPC4-TTLL3A0A0A6YYG9 625 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 LRRN3E7EW58 273 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 AGAP6Q5VW22 663 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 CARM1Q86X55 608 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 CIARTQ8N365 385 aaPredicted RBP17.73■□□□□ 0.43
CLK3-225ENST00000569063 POU5F2Q8N7G0 328 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 OR2T12Q8NG77 320 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 OR5J2Q8NH18 312 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 GTPBP3Q969Y2 492 aaKnown RBP17.73■□□□□ 0.43
CLK3-225ENST00000569063 COX4I2Q96KJ9 171 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 LRR1Q96L50 414 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 ALG2Q9H553 416 aa17.73■□□□□ 0.43
CLK3-225ENST00000569063 CADP27708 2225 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 H7C1Q1 480 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 COX4I1P13073 169 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 KDELR2P33947 212 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 TTKP33981 857 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 CDKN1AP38936 164 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 UBE2NP61088 152 aaKnown RBP17.72■□□□□ 0.43
CLK3-225ENST00000569063 POU3F1Q03052 451 aaPredicted RBP17.72■□□□□ 0.43
CLK3-225ENST00000569063 ETFDHQ16134 617 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 ZNF74Q16587 644 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 B3GLCTQ6Y288 498 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 ARPINQ7Z6K5 226 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 C20orf196Q8IYI0 205 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 MICU2Q8IYU8 434 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 PRSS27Q9BQR3 290 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 POLR2J2Q9GZM3 115 aaKnown RBP17.72■□□□□ 0.43
CLK3-225ENST00000569063 POLR2J3Q9H1A7 115 aaKnown RBP17.72■□□□□ 0.43
CLK3-225ENST00000569063 NELFAQ9H3P2 528 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 FKRPQ9H9S5 495 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 CRLF2Q9HC73 371 aa17.72■□□□□ 0.43
CLK3-225ENST00000569063 MOV10Q9HCE1 1003 aaKnown RBP17.72■□□□□ 0.43
CLK3-225ENST00000569063 FLNAP21333 2647 aaKnown RBP17.71■□□□□ 0.43
CLK3-225ENST00000569063 A0A096LPE4 126 aa17.71■□□□□ 0.43
CLK3-225ENST00000569063 A0A1W2PPZ6 126 aa17.71■□□□□ 0.43
CLK3-225ENST00000569063 ELOVL7A1L3X0 281 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms