RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CENPPQ6IPU0 288 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 C3orf62Q6ZUJ4 267 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 TRPM8Q7Z2W7 1104 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ERO1BQ86YB8 467 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 TGIF2LYQ8IUE0 185 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CDKL3Q8IVW4 592 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CD302Q8IX05 232 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 TCAIMQ8N3R3 496 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF565Q8N9K5 539 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 OR7G1Q8NGA0 311 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 PDCD6IPQ8WUM4 868 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SCFD1Q8WVM8 642 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 HAVCR1Q96D42 359 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 TMA16Q96EY4 203 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 C16orf74Q96GX8 76 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ERP44Q9BS26 406 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 C9orf16Q9BUW7 83 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 NMUR2Q9GZQ4 415 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 NAT10Q9H0A0 1025 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SLC25A51Q9H1U9 297 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 Q9H3A6 140 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 RPRD1BQ9NQG5 326 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ZC4H2Q9NQZ6 224 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 GID8Q9NWU2 228 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 TAS2R7Q9NYW3 318 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SLC7A8Q9UHI5 535 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 KIAA1257Q9ULG3 409 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 FOXJ3Q9UPW0 622 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 PDE10AQ9Y233 779 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM32AQ9Y421 112 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 MAD1L1Q9Y6D9 718 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 COMMD3-BMI1R4GMX3 469 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 VCANP13611 3396 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ALPK3Q96L96 1907 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 MUC3AQ02505 3323 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 LAMB4A4D0S4 1761 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 BRWD1Q9NSI6 2320 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 RNF103-CHMP3A0A140T963 221 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PVALEFA0A1B0GWK0 134 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM47DPA6NHR8 397 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 LRRC30A6NM36 301 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 OR5K4A6NMS3 321 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 MIF4GDA9UHW6 222 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 E9PLD3 99 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 K7ERQ8 282 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 STX10O60499 249 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PSIP1O75475 530 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 IL6P05231 212 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 RETP07949 1114 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 CD55P08174 381 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 ANXA4P09525 319 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 CCDC130P13994 396 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 GALP22466 123 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 HNMTP50135 292 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PSMD4P55036 377 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PSMC5P62195 406 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 POLR2GP62487 172 aaKnown RBP eCLIP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 RPL32P62910 135 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 BEX3Q00994 111 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 KDSRQ06136 332 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 CAPRIN1Q14444 709 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 ALX1Q15699 326 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 C2orf83Q53S99 150 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 OR2B11Q5JQS5 317 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 CCNJQ5T5M9 372 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 WSCD1Q658N2 575 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PVRIGQ6DKI7 326 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 SULT1C3Q6IMI6 304 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 SCARA5Q6ZMJ2 495 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 TAS2R42Q7RTR8 314 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 HDDC2Q7Z4H3 204 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 HSD11B1LQ7Z5J1 315 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 SERPINA9Q86WD7 417 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 NUDCD3Q8IVD9 361 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 IFT20Q8IY31 132 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 LIX1Q8N485 282 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 C14orf178Q8N769 122 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 BCORP1Q8N888 145 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 ZBTB44Q8NCP5 570 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 GMCL1P1Q8NEA9 526 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 OR5T1Q8NG75 326 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 RNF139Q8WU17 664 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 STARD8Q92502 1023 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PSMG2Q969U7 264 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 TADA1Q96BN2 335 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 C14orf79Q96F83 325 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 MAGEB18Q96M61 343 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 SLC29A1Q99808 456 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 CIB1Q99828 191 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 TRIM62Q9BVG3 475 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 NFKBIZQ9BYH8 718 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 YIPF3Q9GZM5 350 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 COMMD4Q9H0A8 199 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 OR51B5Q9H339 312 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 TPK1Q9H3S4 243 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 LY9Q9HBG7 655 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 NEK6Q9HC98 313 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PALMDQ9NP74 551 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 MRPL40Q9NQ50 206 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 YAE1D1Q9NRH1 226 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms