RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	ASPN	Q9BXN1	380 aa		12.13	□□□□□ -0.47
PKD1-231	ENST00000566784	MRPL39	Q9NYK5	338 aa	Known RBP	12.13	□□□□□ -0.47
PKD1-231	ENST00000566784	TLN2	Q9Y4G6	2542 aa		12.13	□□□□□ -0.47
PKD1-231	ENST00000566784	TRAPPC13	A5PLN9	417 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	CPSF4L	A6NMK7	179 aa	Known RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	MS4A18	H0YCH9	400 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784		M0R1B8	84 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	SLC43A1	O75387	559 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	UPK3A	O75631	287 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	LYPD3	O95274	346 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	INHBB	P09529	407 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	HOXB1	P14653	301 aa	Predicted RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	NQO1	P15559	274 aa	Known RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	ATP5J2	P56134	94 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	LGALS3BP	Q08380	585 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	MS4A18	Q3C1V0	323 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	TBRG1	Q3YBR2	411 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	HIKESHI	Q53FT3	197 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	HMBOX1	Q6NT76	420 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	LINGO2	Q7L985	606 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	RBM45	Q8IUH3	476 aa	Known RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	UEVLD	Q8IX04	471 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	DEPDC4	Q8N2C3	294 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	RP9	Q8TA86	221 aa	Known RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	PROX1	Q92786	737 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	MPP4	Q96JB8	637 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	MOGAT1	Q96PD6	335 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	BDH2	Q9BUT1	245 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	SLC19A3	Q9BZV2	496 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	BAG5	Q9UL15	447 aa		12.12	□□□□□ -0.47
PKD1-231	ENST00000566784	ARFGEF3	Q5TH69	2177 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	FAM220BP	B1ANY3	271 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	CCDC22	O60826	627 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	HPR	P00739	348 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	IFNA14	P01570	189 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	CD8A	P01732	235 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	THY1	P04216	161 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	CDH2	P19022	906 aa	Predicted RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	CBL	P22681	906 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	IL1RL1	Q01638	556 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ROR2	Q01974	943 aa	Known RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	PUDP	Q08623	228 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	PMS2P3	Q13401	168 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ETFDH	Q16134	617 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ANKRD16	Q6P6B7	361 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	SLC22A25	Q6T423	547 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	NHLRC1	Q6VVB1	395 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	WDR88	Q6ZMY6	472 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ARPIN	Q7Z6K5	226 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	PXK	Q7Z7A4	578 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	TMEM123	Q8N131	208 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	PIK3C3	Q8NEB9	887 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	OR5J2	Q8NH18	312 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	BCL2L2	Q92843	193 aa	Predicted RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	TRMT61A	Q96FX7	289 aa	Known RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	COX4I2	Q96KJ9	171 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	OR2M2	Q96R28	347 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	DHRS9	Q9BPW9	319 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ZNF426	Q9BUY5	554 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	C1QTNF6	Q9BXI9	259 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	POLR2J2	Q9GZM3	115 aa	Known RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	POLR2J3	Q9H1A7	115 aa	Known RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ALG2	Q9H553	416 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	MOV10	Q9HCE1	1003 aa	Known RBP	12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ARMCX1	Q9P291	453 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	AP3M1	Q9Y2T2	418 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	NOX1	Q9Y5S8	564 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784	ZAN	Q9Y493	2812 aa		12.11	□□□□□ -0.47
PKD1-231	ENST00000566784		E7EQL1	145 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	PLPP3	O14495	311 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	HLA-DOB	P13765	273 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	PTN	P21246	168 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	SPOCK1	Q08629	439 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	ZNF74	Q16587	644 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	C3orf36	Q3SXR2	165 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	AGAP6	Q5VW22	663 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	ZNF544	Q6NX49	715 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	TTC33	Q6PID6	262 aa	Predicted RBP	12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	CARM1	Q86X55	608 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	GPR137C	Q8N3F9	429 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	C10orf53	Q8N6V4	93 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	POU5F2	Q8N7G0	328 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	OR2T12	Q8NG77	320 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	GTPBP3	Q969Y2	492 aa	Known RBP	12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	RCN3	Q96D15	328 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	LRR1	Q96L50	414 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	NELFA	Q9H3P2	528 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	GSX1	Q9H4S2	264 aa	Predicted RBP	12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	FKRP	Q9H9S5	495 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	GPR35	Q9HC97	309 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	POU2F3	Q9UKI9	436 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	SLC7A7	Q9UM01	511 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	USP22	Q9UPT9	525 aa		12.1	□□□□□ -0.47
PKD1-231	ENST00000566784	SH3GLB1	Q9Y371	365 aa		12.1	□□□□□ -0.47

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