RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 LRIF1Q5T3J3 769 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 FAM91A1Q658Y4 838 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 ULK3Q6PHR2 472 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 DHRS4L2Q6PKH6 230 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 EPGNQ6UW88 154 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 LSRQ86X29 649 aaPredicted RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 KRT73Q86Y46 540 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 ADPRHL1Q8NDY3 354 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 MAL2Q969L2 176 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 TLCD1Q96CP7 247 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 LRR1Q96L50 414 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 GPR35Q9HC97 309 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 CORINQ9Y5Q5 1042 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
RNF40-209ENST00000566703 FBN1P35555 2871 aaKnown RBP13.01□□□□□ -0.33
RNF40-209ENST00000566703 TRAV36DV7A0A075B6V5 113 aa13□□□□□ -0.33
RNF40-209ENST00000566703 LOC100289279A0A1B0GTE1 492 aa13□□□□□ -0.33
RNF40-209ENST00000566703 STAMBPO95630 424 aa13□□□□□ -0.33
RNF40-209ENST00000566703 ARAFP10398 606 aa13□□□□□ -0.33
RNF40-209ENST00000566703 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
RNF40-209ENST00000566703 ZNF23P17027 643 aa13□□□□□ -0.33
RNF40-209ENST00000566703 GIFP27352 417 aa13□□□□□ -0.33
RNF40-209ENST00000566703 GRPRP30550 384 aa13□□□□□ -0.33
RNF40-209ENST00000566703 CALCRP30988 508 aa13□□□□□ -0.33
RNF40-209ENST00000566703 STX1BP61266 288 aa13□□□□□ -0.33
RNF40-209ENST00000566703 HOXC5Q00444 222 aa13□□□□□ -0.33
RNF40-209ENST00000566703 ALG10BQ5I7T1 473 aa13□□□□□ -0.33
RNF40-209ENST00000566703 REEP3Q6NUK4 255 aa13□□□□□ -0.33
RNF40-209ENST00000566703 SLC2A7Q6PXP3 512 aa13□□□□□ -0.33
RNF40-209ENST00000566703 ANKS4BQ8N8V4 417 aa13□□□□□ -0.33
RNF40-209ENST00000566703 BHLHE22Q8NFJ8 381 aaPredicted RBP13□□□□□ -0.33
RNF40-209ENST00000566703 ZBTB9Q96C00 473 aa13□□□□□ -0.33
RNF40-209ENST00000566703 MSI2Q96DH6 328 aaKnown RBP13□□□□□ -0.33
RNF40-209ENST00000566703 SLC47A1Q96FL8 570 aa13□□□□□ -0.33
RNF40-209ENST00000566703 OR2M2Q96R28 347 aa13□□□□□ -0.33
RNF40-209ENST00000566703 TMBIM4Q9HC24 238 aa13□□□□□ -0.33
RNF40-209ENST00000566703 CRLF2Q9HC73 371 aa13□□□□□ -0.33
RNF40-209ENST00000566703 USP22Q9UPT9 525 aa13□□□□□ -0.33
RNF40-209ENST00000566703 ARFGEF3Q5TH69 2177 aa13□□□□□ -0.33
RNF40-209ENST00000566703 ANK3Q12955 4377 aaKnown RBP12.99□□□□□ -0.33
RNF40-209ENST00000566703 A0A087WUJ7 227 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 IGHV4-61A0A0C4DH41 118 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 A0A1B0GWA3 101 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 PRORSD1PA6NEY8 169 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 ZNF99A8MXY4 864 aaPredicted RBP12.99□□□□□ -0.33
RNF40-209ENST00000566703 hCG_2039718K7EN88 272 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 M0R082 166 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 SRD5A1P18405 259 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 HNF1AP20823 631 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 IGFBP5P24593 272 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 THBS4P35443 961 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 EVX1P49640 407 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 TUBA1BP68363 451 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 TUBA4AP68366 448 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 CDK6Q00534 326 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 POU3F1Q03052 451 aaPredicted RBP12.99□□□□□ -0.33
RNF40-209ENST00000566703 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 IQCCQ4KMZ1 466 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 GCNT6Q5T4J0 391 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 BLOC1S3Q6QNY0 202 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 VHLLQ6RSH7 139 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 TUBA1AQ71U36 451 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 TMEM123Q8N131 208 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 SCAIQ8N9R8 606 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 ZNF417Q8TAU3 575 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 SLC41A3Q96GZ6 507 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 C7orf26Q96N11 449 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 ZNF587Q96SQ5 575 aaPredicted RBP12.99□□□□□ -0.33
RNF40-209ENST00000566703 EPYCQ99645 322 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 RSPO3Q9BXY4 272 aaPredicted RBP12.99□□□□□ -0.33
RNF40-209ENST00000566703 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 TMEM27Q9HBJ8 222 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 SLC25A37Q9NYZ2 338 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 SELENONQ9NZV5 590 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 KLHL14Q9P2G3 628 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 TESQ9UGI8 421 aaKnown RBP12.99□□□□□ -0.33
RNF40-209ENST00000566703 COL6A5A8TX70 2615 aa12.99□□□□□ -0.33
RNF40-209ENST00000566703 ATRQ13535 2644 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 IGKV1D-42A0A075B6H8 117 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 IGHV2OR16-5A0A0B4J2B6 119 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 TMEM129A0AVI4 362 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 SLC35F4A4IF30 521 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 MS4A18H0YCH9 400 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 TRAF3IP2O43734 574 aaPredicted RBP12.98□□□□□ -0.33
RNF40-209ENST00000566703 GPX2P18283 190 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 HTR2AP28223 471 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 CARTPTQ16568 116 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 MS4A18Q3C1V0 323 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 FAM120AOSQ5T036 256 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 NHLRC1Q6VVB1 395 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 ZNF627Q7L945 461 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 SNX32Q86XE0 403 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 FUNDC1Q8IVP5 155 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 UEVLDQ8IX04 471 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 C20orf196Q8IYI0 205 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 ZNF786Q8N393 782 aa12.98□□□□□ -0.33
RNF40-209ENST00000566703 ARIH2OSQ8N7S6 290 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms