RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 TGFBR1P36897 503 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 RPS18P62269 152 aaKnown RBP16.13■□□□□ 0.17
GDE1-203ENST00000564172 EEF1A1P5Q5VTE0 462 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 C1orf94Q6P1W5 598 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 ZNF730Q6ZMV8 503 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 LUZP2Q86TE4 346 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 SETD9Q8NE22 299 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 FAM71CQ8NEG0 241 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 PHOSPHO1Q8TCT1 267 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 ELP5Q8TE02 316 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 ACOT11Q8WXI4 607 aaPredicted RBP16.13■□□□□ 0.17
GDE1-203ENST00000564172 PRSS27Q9BQR3 290 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 TMEM27Q9HBJ8 222 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 RDH8Q9NYR8 311 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 FARSAQ9Y285 508 aaKnown RBP16.13■□□□□ 0.17
GDE1-203ENST00000564172 PCDHGA6Q9Y5G7 932 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 hCG_1807616A0A1W2PRN6 198 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 TMEM82A0PJX8 343 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 DBX1A6NMT0 343 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 WWP2O00308 870 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 EIF1BO60739 113 aaKnown RBP16.13■□□□□ 0.17
GDE1-203ENST00000564172 IGHEP01854 428 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 IFNA4P05014 189 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 EIF1P41567 113 aaKnown RBP16.13■□□□□ 0.17
GDE1-203ENST00000564172 ZNF613Q6PF04 617 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 Q6ZPB1 254 aaPredicted RBP16.13■□□□□ 0.17
GDE1-203ENST00000564172 GHDCQ8N2G8 530 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 OR11G2Q8NGC1 345 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 WBP1Q96G27 269 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 HRASLS5Q96KN8 279 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 TRIM2Q9C040 744 aa16.13■□□□□ 0.17
GDE1-203ENST00000564172 SDK2Q58EX2 2172 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 PROB1E7EW31 1015 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 RGS10O43665 173 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 LYPD3O95274 346 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 NGFRP08138 427 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 ALDH6A1Q02252 535 aaKnown RBP16.12■□□□□ 0.17
GDE1-203ENST00000564172 IRF3Q14653 427 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 TRILQ7L0X0 811 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 PRICKLE2Q7Z3G6 844 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 TMEM255BQ8WV15 326 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 RADILQ96JH8 1075 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 PITX2Q99697 317 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 GPA33Q99795 319 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 RTN4RQ9BZR6 473 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 GSN-AS1Q9NRJ2 163 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 MYOTQ9UBF9 498 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 RNF6Q9Y252 685 aa16.12■□□□□ 0.17
GDE1-203ENST00000564172 SLC35F4A4IF30 521 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 ALG1L2C9J202 215 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 SOCS6O14544 535 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 CSRP1P21291 193 aaKnown RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 FAM76BQ5HYJ3 339 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 WDR88Q6ZMY6 472 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 IPCEF1Q8WWN9 437 aaPredicted RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 LINC00052Q96N35 136 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 ZNF251Q9BRH9 671 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 DEFB126Q9BYW3 111 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 ESRP2Q9H6T0 727 aaKnown RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 ADAM30Q9UKF2 790 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 ING4Q9UNL4 249 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 A0A0B4J2E0 115 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 A0A1B0GWA3 101 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 A0A1B0GX12 115 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 A0A1W2PQD3 144 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 RAB19A4D1S5 217 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 WRBO00258 174 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 OSMP13725 252 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 IFNGR2P38484 337 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 RRAS2P62070 204 aaPredicted RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 RPS15P62841 145 aaKnown RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 EXT1Q16394 746 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 PLAG1Q6DJT9 500 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 CBLN3Q6UW01 205 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 CD300LDQ6UXZ3 194 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 MBOAT2Q6ZWT7 520 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 MARCH9Q86YJ5 346 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 CCDC71Q8IV32 467 aaPredicted RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 ZNF440Q8IYI8 595 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 POGLUT1Q8NBL1 392 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 NLGN4YQ8NFZ3 816 aaPredicted RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 ZC3HAV1LQ96H79 300 aaKnown RBP16.11■□□□□ 0.17
GDE1-203ENST00000564172 GSX2Q9BZM3 304 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 BIN3Q9NQY0 253 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 PFDN2Q9UHV9 154 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 ZNF292O60281 2723 aa16.11■□□□□ 0.17
GDE1-203ENST00000564172 MPTX1A8MV57 137 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 GTPBP1O00178 669 aaKnown RBP16.1■□□□□ 0.17
GDE1-203ENST00000564172 TM4SF5O14894 197 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 MYL12BO14950 172 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 ZNF264O43296 627 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 OIP5O43482 229 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 TSC22D2O75157 780 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 MT-ND2P03891 347 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 MYL12AP19105 171 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 TNFSF8P32971 234 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 OMPP47874 163 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 CRISP1P54107 249 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 SKP2Q13309 424 aa16.1■□□□□ 0.17
GDE1-203ENST00000564172 SSPNQ14714 243 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms