RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 RTP2Q5QGT7 225 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 ENPP7Q6UWV6 458 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 WDR88Q6ZMY6 472 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SLC22A12Q96S37 553 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 NRIP2Q9BQI9 281 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SELENOIQ9C0D9 397 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RPS10P5Q9NQ39 176 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 LHX9Q9NQ69 397 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 UFSP2Q9NUQ7 469 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SLC35A3Q9Y2D2 325 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 CACNA1CQ13936 2221 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 A0A0B4J2A0 478 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RPP14O95059 124 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 PAPLNO95428 1278 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 PMS2P2O95744 297 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 F3P13726 295 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 GABRR2P28476 465 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 CD34P28906 385 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 NTSP30990 170 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 EIF2S3P41091 472 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 HTRA4P83105 476 aaPredicted RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 LMAN2Q12907 356 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RPL22L1Q6P5R6 122 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 FRRS1Q6ZNA5 592 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 GAREM2Q75VX8 874 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SSX9Q7RTT3 188 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 NUDT13Q86X67 352 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 ZNF561Q8N587 486 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 CCDC107Q8WV48 283 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 GGACTQ9BVM4 153 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 XKR8Q9H6D3 395 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RCC2Q9P258 522 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 METTL1Q9UBP6 276 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 TAC3Q9UHF0 121 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SHPKQ9UHJ6 478 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 VWA8A3KMH1 1905 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 M0QYG6 137 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 CSN2P05814 226 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SFTA3P0C7M3 94 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 FOLR2P14207 255 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 AVPR2P30518 371 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 HOXC8P31273 242 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 P2RY4P51582 365 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 PRKXP51817 358 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 PDX1P52945 283 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RAB2AP61019 212 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 SKP2Q13309 424 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 PRAMEF17Q5VTA0 474 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 STX12Q86Y82 276 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 TRAPPC5Q8IUR0 188 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 OR5AP2Q8NGF4 316 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 OR5M8Q8NGP6 311 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 MACROD1Q9BQ69 325 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 KLF16Q9BXK1 252 aaPredicted RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 USP36Q9P275 1121 aaKnown RBP11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 NCDNQ9UBB6 729 aa11.32□□□□□ -0.6
SCAMP2-204ENST00000563829 A6NLC8 198 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 H7BY64 318 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 SULT2B1O00204 365 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 CD8AP01732 235 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 RPN2P04844 631 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 PGAM2P15259 253 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 DUSP2Q05923 314 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 ALKBH1Q13686 389 aaKnown RBP11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 SCGB2B2Q4G0G5 96 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 STEAP1BQ6NZ63 245 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 TMEM173Q86WV6 379 aaPredicted RBP11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 OR4E2Q8NGC2 313 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 OR4K13Q8NH42 304 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 PRAP1Q96NZ9 151 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 NKX3-1Q99801 234 aaPredicted RBP11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 MS4A8Q9BY19 250 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 KCNK15Q9H427 330 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 CLDND1Q9NY35 253 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 DMRT1Q9Y5R6 373 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 ARID1AO14497 2285 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 GXYLT2A0PJZ3 443 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 RHPN2P1A8MT19 583 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 FGF16O43320 207 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 ZFPL1O95159 310 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 RCBTB2O95199 551 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 ZIC2O95409 532 aaPredicted RBP11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 HLA-AP01891 365 aaKnown RBP11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 CD2P06729 351 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 SSR2P43308 183 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 EFNB2P52799 333 aa11.31□□□□□ -0.6
SCAMP2-204ENST00000563829 EPHB3P54753 998 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms