RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 IL1RL1Q01638 556 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 SCGB2A2Q13296 93 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 CCNIQ14094 377 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 SLC9B1Q4ZJI4 515 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 C6orf89Q6UWU4 347 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 MDP1Q86V88 176 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 SEMA6DQ8NFY4 1073 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 MRPL24Q96A35 216 aaKnown RBP16.1■□□□□ 0.17
NME3-204ENST00000563498 MS4A5Q9H3V2 200 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 OCEL1Q9H607 264 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 C12orf10Q9HB07 376 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 CACYBPQ9HB71 228 aaKnown RBP16.1■□□□□ 0.17
NME3-204ENST00000563498 SLC6A13Q9NSD5 602 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 IFT52Q9Y366 437 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 A0A0G2JPF8 293 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 HNRNPCL2B2RXH8 293 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 HNRNPCL3B7ZW38 293 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 LYNX1G3V0Z9 82 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 AIM2O14862 343 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 TM9SF1O15321 606 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 SYNGR3O43761 229 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 AKAP8O43823 692 aaKnown RBP16.09■□□□□ 0.17
NME3-204ENST00000563498 OR2T1O43869 369 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 HNRNPCL1O60812 293 aaKnown RBP16.09■□□□□ 0.17
NME3-204ENST00000563498 VENTXO95231 258 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 IL6P05231 212 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 ZCCHC18P0CG32 403 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 HNRNPCL4P0DMR1 293 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 LYNX1P0DP58 116 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 ETFAP13804 333 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 CRATP43155 626 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 DSTNP60981 165 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 C1DQ13901 141 aaKnown RBP16.09■□□□□ 0.17
NME3-204ENST00000563498 ATG16L1Q676U5 607 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 KRT80Q6KB66 452 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 C5orf46Q6UWT4 87 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 TMEM123Q8N131 208 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 ZNF837Q96EG3 531 aaPredicted RBP16.09■□□□□ 0.17
NME3-204ENST00000563498 KTI12Q96EK9 354 aaPredicted RBP16.09■□□□□ 0.17
NME3-204ENST00000563498 OR2M2Q96R28 347 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 TPK1Q9H3S4 243 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 METTL17Q9H7H0 456 aaPredicted RBP16.09■□□□□ 0.17
NME3-204ENST00000563498 B3GNT2Q9NY97 397 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 REV1Q9UBZ9 1251 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 SEC14L4Q9UDX3 406 aa16.09■□□□□ 0.17
NME3-204ENST00000563498 M0R233 179 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 SDHDO14521 159 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 CAPZA2P47755 286 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 RPS26P11Q5JNZ5 115 aaPredicted RBP16.08■□□□□ 0.16
NME3-204ENST00000563498 FAM69AQ5T7M9 428 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 TMEM186Q96B77 213 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 TMEM19Q96HH6 336 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 MRPL37Q9BZE1 423 aaKnown RBP16.08■□□□□ 0.16
NME3-204ENST00000563498 RACGAP1Q9H0H5 632 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 TPT1P8Q9HAU6 139 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 PNPOQ9NVS9 261 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 SPEF1Q9Y4P9 236 aa16.08■□□□□ 0.16
NME3-204ENST00000563498 TMEM247A6NEH6 219 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 M0R082 166 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 SPRY1O43609 319 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 TRAF3IP2O43734 574 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 TFP02787 698 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 ZNF35P13682 527 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 BGNP21810 368 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 ACHEP22303 614 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 GLRXP35754 106 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 GPR6P46095 362 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 COMPP49747 757 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 MRPS11P82912 194 aaKnown RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 STX3Q13277 289 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 MSMPQ1L6U9 139 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 GSG1Q2KHT4 349 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 ZNF311Q5JNZ3 666 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 ELFN2Q5R3F8 820 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 REP15Q6BDI9 236 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 H1FNTQ75WM6 255 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 ZNF627Q7L945 461 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 NET1Q7Z628 596 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 ADPRHL1Q8NDY3 354 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 ZNF417Q8TAU3 575 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 AENQ8WTP8 325 aaKnown RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 SLC38A4Q969I6 547 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 ZMYND19Q96E35 227 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 ZNF587Q96SQ5 575 aaPredicted RBP16.07■□□□□ 0.16
NME3-204ENST00000563498 BCL2L10Q9HD36 194 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 HIF1ANQ9NWT6 349 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 GRIP1Q9Y3R0 1128 aa16.07■□□□□ 0.16
NME3-204ENST00000563498 HLA-HP01893 362 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 MSMBP08118 114 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 ZNF14P17017 642 aaPredicted RBP16.06■□□□□ 0.16
NME3-204ENST00000563498 TMEM33P57088 247 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 VSNL1P62760 191 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 C20orf196Q8IYI0 205 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 LSMEM1Q8N8F7 131 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 CLDND2Q8NHS1 167 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 RDH5Q92781 318 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 TAAR8Q969N4 342 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 LRR1Q96L50 414 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 ZNF75AQ96N20 296 aa16.06■□□□□ 0.16
NME3-204ENST00000563498 DENND2DQ9H6A0 471 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms