RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 KIF17Q9P2E2 1029 aa11.86□□□□□ -0.51
SPG7-207ENST00000563218 TESQ9UGI8 421 aaKnown RBP11.86□□□□□ -0.51
SPG7-207ENST00000563218 LAMP3Q9UQV4 416 aa11.86□□□□□ -0.51
SPG7-207ENST00000563218 EMC9Q9Y3B6 208 aa11.86□□□□□ -0.51
SPG7-207ENST00000563218 ORC6Q9Y5N6 252 aa11.86□□□□□ -0.51
SPG7-207ENST00000563218 MAGED1Q9Y5V3 778 aaPredicted RBP11.86□□□□□ -0.51
SPG7-207ENST00000563218 SVEP1Q4LDE5 3571 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 NBEAL1Q6ZS30 2694 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 A0A0J9YW62 118 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 C7orf72A4D263 438 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 CPSF4LA6NMK7 179 aaKnown RBP11.85□□□□□ -0.51
SPG7-207ENST00000563218 CRLF1O75462 422 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 CCNB2O95067 398 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 PLGP00747 810 aaPredicted RBP11.85□□□□□ -0.51
SPG7-207ENST00000563218 ALPLP05186 524 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 GKN3PP0CG01 181 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 FCGR2AP12318 317 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 PRKACGP22612 351 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 AGTR1P30556 359 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 CDKN1AP38936 164 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 HMGA2P52926 109 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 CTBP2P56545 445 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 HOXC5Q00444 222 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 LAPTM4AQ15012 233 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 MICAQ29983 383 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 GLYR1Q49A26 553 aaPredicted RBP11.85□□□□□ -0.51
SPG7-207ENST00000563218 ENTPD8Q5MY95 495 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 ZNF440Q8IYI8 595 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 OFCC1Q8IZS5 231 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 ZNF611Q8N823 705 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 ATG16L2Q8NAA4 619 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 OR10G2Q8NGC3 310 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 POC1BQ8TC44 478 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 ROBO4Q8WZ75 1007 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 S100PBPQ96BU1 408 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 SH3YL1Q96HL8 342 aaPredicted RBP11.85□□□□□ -0.51
SPG7-207ENST00000563218 CXorf56Q9H5V9 222 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 SMURF2Q9HAU4 748 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 CTPS2Q9NRF8 586 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 SMPD3Q9NY59 655 aaPredicted RBP11.85□□□□□ -0.51
SPG7-207ENST00000563218 RAB26Q9ULW5 256 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 STAB1Q9NY15 2570 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 ALPK2Q86TB3 2170 aa11.85□□□□□ -0.51
SPG7-207ENST00000563218 HEATR1Q9H583 2144 aaKnown RBP11.84□□□□□ -0.51
SPG7-207ENST00000563218 ANK2Q01484 3957 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 A0A1W2PQD3 144 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 A0A1W2PRQ8 180 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 LINC01387J3KSC0 135 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 GTPBP1O00178 669 aaKnown RBP11.84□□□□□ -0.51
SPG7-207ENST00000563218 FAAHO00519 579 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 FMO6PO60774 539 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 NDUFS7O75251 213 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 CYP7B1O75881 506 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 OR5F1O95221 314 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 NGFRP08138 427 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 SOD3P08294 240 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 UBTFL6P0CB48 400 aaPredicted RBP11.84□□□□□ -0.51
SPG7-207ENST00000563218 THRBP10828 461 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 UBL4AP11441 157 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 ANXA8P13928 327 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 UQCRBP14927 111 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 ZNF17P17021 662 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 LIMS1P48059 325 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 CLK3P49761 638 aaKnown RBP11.84□□□□□ -0.51
SPG7-207ENST00000563218 RAD23AP54725 363 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 C17orf67Q0P5P2 114 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 ST3GAL3Q11203 375 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 DGCR6Q14129 220 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 TRAM2Q15035 370 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 CLEC12BQ2HXU8 276 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 PLPPR5Q32ZL2 321 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 RFX4Q33E94 735 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 NUFIP2Q7Z417 695 aaKnown RBP11.84□□□□□ -0.51
SPG7-207ENST00000563218 OR2V1Q8NHB1 315 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 PHOSPHO1Q8TCT1 267 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 RDH12Q96NR8 316 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 SRXN1Q9BYN0 137 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 TMEM27Q9HBJ8 222 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 MED17Q9NVC6 651 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 PLCE1Q9P212 2302 aa11.84□□□□□ -0.51
SPG7-207ENST00000563218 TRBV4-1A0A0J9YWV2 114 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 TRAPPC13A5PLN9 417 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 ARRDC5A6NEK1 342 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 OIP5O43482 229 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 TPST2O60704 377 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 BCAS1O75363 584 aaPredicted RBP11.83□□□□□ -0.52
SPG7-207ENST00000563218 PRG2P13727 222 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 PPP3CBP16298 524 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 CDH2P19022 906 aaPredicted RBP11.83□□□□□ -0.52
SPG7-207ENST00000563218 IGFBP5P24593 272 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 ACVR1BP36896 505 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 IL1RL1Q01638 556 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 EPS8Q12929 822 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 OR1Q1Q15612 314 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 CD226Q15762 336 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 SEZ6L2Q6UXD5 910 aa11.83□□□□□ -0.52
SPG7-207ENST00000563218 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
SPG7-207ENST00000563218 GTPBP8Q8N3Z3 284 aaPredicted RBP11.83□□□□□ -0.52
SPG7-207ENST00000563218 LINC00471Q8N535 108 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms