RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 HAS3O00219 553 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 HCRTR1O43613 425 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 ZNF780AO75290 641 aaPredicted RBP4.4□□□□□ -1.71
SMG1-204ENST00000561940 ATP1B2P14415 290 aaPredicted RBP4.4□□□□□ -1.71
SMG1-204ENST00000561940 CXCR2P25025 360 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 SULT1E1P49888 294 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 TPMTP51580 245 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 CAV2P51636 162 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 ACTR3P61158 418 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 TGFBR3Q03167 851 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 CTSL3PQ5NE16 218 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 HSDL2Q6YN16 418 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 IL34Q6ZMJ4 242 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 PRSS41Q7RTY9 318 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 SLC26A11Q86WA9 606 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 SLC22A9Q8IVM8 553 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 FAM83FQ8NEG4 500 aaPredicted RBP4.4□□□□□ -1.71
SMG1-204ENST00000561940 OR2AP1Q8NGE2 309 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 OR1L6Q8NGR2 347 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 AKR7LQ8NHP1 331 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 ANKRD49Q8WVL7 239 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 DCUN1D4Q92564 292 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 PANX2Q96RD6 677 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 TSG101Q99816 390 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 RPRD2Q5VT52 1461 aaKnown RBP4.4□□□□□ -1.71
SMG1-204ENST00000561940 SH3TC1Q8TE82 1336 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 MAP3K5Q99683 1374 aa4.4□□□□□ -1.71
SMG1-204ENST00000561940 SPHKAPQ2M3C7 1700 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 A0A0G2JLM5 398 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 UQCRFS1P1P0C7P4 283 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 CD1EP15812 388 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 OPRD1P41143 372 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 RGRP47804 291 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 APOC4P55056 127 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 RPL23AP62750 156 aaKnown RBP4.39□□□□□ -1.71
SMG1-204ENST00000561940 OGDHQ02218 1023 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 ZNF763Q0D2J5 394 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 GK3PQ14409 553 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 ZNF79Q15937 498 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 CCDC183Q5T5S1 534 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 C1orf146Q5VVC0 180 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 ZYG11AQ6WRX3 759 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 ZNF740Q8NDX6 193 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 RNF139Q8WU17 664 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 NUS1Q96E22 293 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 ZNF641Q96N77 438 aaPredicted RBP4.39□□□□□ -1.71
SMG1-204ENST00000561940 ACTR6Q9GZN1 396 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 ZDHHC11Q9H8X9 412 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 NMRAL1Q9HBL8 299 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 SLC7A8Q9UHI5 535 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 TRAF3IP3Q9Y228 551 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 SLIT2O94813 1529 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 MAST1Q9Y2H9 1570 aa4.39□□□□□ -1.71
SMG1-204ENST00000561940 MYOM2P54296 1465 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 GPATCH8Q9UKJ3 1502 aaKnown RBP4.38□□□□□ -1.71
SMG1-204ENST00000561940 KIR2DL5BA0A0G2JN68 375 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 KIR2DL5BA0A0G2JPC4 375 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 A0A1W2PPE3 182 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 A0A1W2PPV9 198 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 KLLNB2CW77 178 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 MX1P20591 662 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 SELENOTP62341 195 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 LRRC74AQ0VAA2 488 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 ASPHQ12797 758 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 SAMD4BQ5PRF9 694 aaKnown RBP4.38□□□□□ -1.71
SMG1-204ENST00000561940 TIGD3Q6B0B8 471 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 RFLNAQ6ZTI6 216 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 H2BFWTQ7Z2G1 175 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 KIR2DL5AQ8N109 375 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 UBE2J2Q8N2K1 259 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 ACOT4Q8N9L9 421 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 KIR2DL5BQ8NHK3 375 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 LINC01006Q8NI28 216 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 BRSK1Q8TDC3 778 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 B3GALT6Q96L58 329 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 SLC39A3Q9BRY0 314 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 TCHPQ9BT92 498 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 CHRDL1Q9BU40 450 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 C20orf85Q9H1P6 137 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 PPA2Q9H2U2 334 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 ANKRD19PQ9H560 264 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 BTNL2Q9UIR0 455 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 TMCO1Q9UM00 188 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 SCN2AQ99250 2005 aa4.38□□□□□ -1.71
SMG1-204ENST00000561940 FAM240BA0A1B0GVZ2 78 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 XKRY2A2RUG3 117 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 RBMY1BA6NDE4 496 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 RBMY1EA6NEQ0 496 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 TMEM110-MUSTN1A8MSY1 372 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 LOC110117498-PIK3R3F6TDL0 507 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 AP3B1O00203 1094 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 MMP23AO75900 390 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 RBMY1DP0C7P1 496 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 RBMY1A1P0DJD3 496 aaKnown RBP4.37□□□□□ -1.71
SMG1-204ENST00000561940 FUT3P21217 361 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 RFC4P35249 363 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 GPM6AP51674 278 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 CDH4P55283 916 aa4.37□□□□□ -1.71
SMG1-204ENST00000561940 OR5I1Q13606 314 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms