RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF43P17038 809 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 MAKP20794 623 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 ATP6V1B2P21281 511 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 IL32P24001 234 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 GTF2E2P29084 291 aaKnown RBP12.22□□□□□ -0.45
TPM1-230ENST00000561266 MS4A2Q01362 244 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 PMS2P3Q13401 168 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 FHL1Q13642 323 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 GABRA6Q16445 453 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 SAMD4BQ5PRF9 694 aaKnown RBP12.22□□□□□ -0.45
TPM1-230ENST00000561266 C16orf89Q6UX73 402 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 FKBP9P1Q75LS8 142 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 TRPM8Q7Z2W7 1104 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 TMEM123Q8N131 208 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 SCAIQ8N9R8 606 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 WDR31Q8NA23 367 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 STEAP2Q8NFT2 490 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 OR5J2Q8NH18 312 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 TMEM239Q8WW34 195 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 LZICQ8WZA0 190 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 OR2M2Q96R28 347 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 ASPNQ9BXN1 380 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 OR10A4Q9H209 315 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 ASB6Q9NWX5 421 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 NDUFAF4Q9P032 175 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 ENPP4Q9Y6X5 453 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 DSCAMO60469 2012 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.21□□□□□ -0.45
TPM1-230ENST00000561266 hCG_2039718K7EN88 272 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 CASKO14936 926 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 SERPINI2O75830 405 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 OR7A10O76100 309 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 MT-ATP6P00846 226 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 IFNW1P05000 195 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 ADORA3P0DMS8 318 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 NQO1P15559 274 aaKnown RBP12.21□□□□□ -0.45
TPM1-230ENST00000561266 CALB2P22676 271 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 IL1RL1Q01638 556 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 PUDPQ08623 228 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 STK11Q15831 433 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 OFCC1Q8IZS5 231 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 MOSPD2Q8NHP6 518 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 SLC7A6OSQ96CW6 309 aaPredicted RBP12.21□□□□□ -0.45
TPM1-230ENST00000561266 MUS81Q96NY9 551 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
TPM1-230ENST00000561266 SLC19A3Q9BZV2 496 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 POLR2J2Q9GZM3 115 aaKnown RBP12.21□□□□□ -0.45
TPM1-230ENST00000561266 POLR2J3Q9H1A7 115 aaKnown RBP12.21□□□□□ -0.45
TPM1-230ENST00000561266 FKRPQ9H9S5 495 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 NANSQ9NR45 359 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 PARPBPQ9NWS1 579 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 UPB1Q9UBR1 384 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 CORINQ9Y5Q5 1042 aa12.21□□□□□ -0.45
TPM1-230ENST00000561266 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 OTOGQ6ZRI0 2925 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 A0A087WUU8 490 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 SLC35F4A4IF30 521 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 TSPAN19P0C672 248 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 THRBP10828 461 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 PPP3CBP16298 524 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 CDH2P19022 906 aaPredicted RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 AHCYP23526 432 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 POU3F1Q03052 451 aaPredicted RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 RPL18Q07020 188 aaKnown RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 ST3GAL3Q11203 375 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 ZP4Q12836 540 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 C1DQ13901 141 aaKnown RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 MFSD13AQ14CX5 517 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 CARD17Q5XLA6 110 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 CYP2R1Q6VVX0 501 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 UEVLDQ8IX04 471 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 PIK3C3Q8NEB9 887 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 LILRB1Q8NHL6 650 aaPredicted RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 SGTBQ96EQ0 304 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 PLPPR2Q96GM1 343 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 PYURFQ96I23 114 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 FUZQ9BT04 418 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 FNDC11Q9BVV2 318 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 C1QTNF6Q9BXI9 259 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 NMNAT1Q9HAN9 279 aaPredicted RBP12.2□□□□□ -0.46
TPM1-230ENST00000561266 FANCFQ9NPI8 374 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 TAS2R16Q9NYV7 291 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 MAGEL2Q9UJ55 1249 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 ZNF229Q9UJW7 825 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 RPS6KA6Q9UK32 745 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 PLEKHA6Q9Y2H5 1048 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 SLC25A15Q9Y619 301 aa12.2□□□□□ -0.46
TPM1-230ENST00000561266 TCRBV5S2A0A599 114 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 CIB4A0PJX0 185 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 OR5H1A6NKK0 313 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 F13BP05160 661 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 IFI30P13284 250 aa12.19□□□□□ -0.46
TPM1-230ENST00000561266 IFNGR1P15260 489 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms