RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PMS2P3Q13401 168 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 GABRA6Q16445 453 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 TIMM23BQ5SRD1 257 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 NIPAL3Q6P499 406 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 C16orf89Q6UX73 402 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 CDH24Q86UP0 819 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 WFDC8Q8IUA0 241 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 OFCC1Q8IZS5 231 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 TMEM123Q8N131 208 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 C10orf53Q8N6V4 93 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 PFN4Q8NHR9 129 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 BCAS4Q8TDM0 211 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 TMEM239Q8WW34 195 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 LIPHQ8WWY8 451 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 PIK3IP1Q96FE7 263 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 TXNDC15Q96J42 360 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 HS6ST2Q96MM7 605 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 TMEM204Q9BSN7 226 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 C20orf141Q9NUB4 165 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 NDE1Q9NXR1 346 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 ENO4A6NNW6 628 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 RAD51DO75771 328 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 SEMG1P04279 462 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 TSPAN19P0C672 248 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 NQO1P15559 274 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 CALB2P22676 271 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 MPGP29372 298 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 ST3GAL3Q11203 375 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 BEX5Q5H9J7 111 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 RINLQ6ZS11 566 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 FKBP9P1Q75LS8 142 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 PXKQ7Z7A4 578 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 P2RY8Q86VZ1 359 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 UEVLDQ8IX04 471 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 WDR31Q8NA23 367 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 OR2M2Q96R28 347 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 NANSQ9NR45 359 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 RHCGQ9UBD6 479 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 UPB1Q9UBR1 384 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 ZNF229Q9UJW7 825 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 RPS6KA6Q9UK32 745 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 NOX1Q9Y5S8 564 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 SLC25A15Q9Y619 301 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 ENPP4Q9Y6X5 453 aa13.42□□□□□ -0.26
SNRPA1-213ENST00000560856 ARPC2O15144 300 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 FOXD4Q12950 439 aaPredicted RBP13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 C1DQ13901 141 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 C9orf135Q5VTT2 229 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 PIK3C3Q8NEB9 887 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 C1orf162Q8NEQ5 155 aaPredicted RBP13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 PLPPR2Q96GM1 343 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 MED29Q9NX70 200 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 TAS2R1Q9NYW7 299 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 NPAP1Q9NZP6 1156 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 NDUFAF4Q9P032 175 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 ST6GALNAC2Q9UJ37 374 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 MAGEL2Q9UJ55 1249 aa13.41□□□□□ -0.26
SNRPA1-213ENST00000560856 A0A087WUU8 490 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 CIB4A0PJX0 185 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 DPRXA6NFQ7 191 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 OR6C65A6NJZ3 312 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 PIP5K1CO60331 668 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 OR7A10O76100 309 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 PLAUP00749 431 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 ADORA3P0DMS8 318 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 FUT1P19526 365 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 MXRA7P84157 204 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 VLDLRP98155 873 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 POU3F1Q03052 451 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 TRAM2Q15035 370 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 PPA1Q15181 289 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 STK11Q15831 433 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 NCMAPQ5T1S8 102 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 OR7E24Q6IFN5 339 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 ZNF837Q96EG3 531 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 SGTBQ96EQ0 304 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 ALKBH3Q96Q83 286 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 EMC6Q9BV81 110 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 FNDC11Q9BVV2 318 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 NELFAQ9H3P2 528 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 NMNAT1Q9HAN9 279 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 SLC17A5Q9NRA2 495 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 SAMD4AQ9UPU9 718 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 MED31Q9Y3C7 131 aa13.4□□□□□ -0.26
SNRPA1-213ENST00000560856 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 SLC35F4A4IF30 521 aa13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 C11orf98E9PRG8 122 aa13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 SLC43A1O75387 559 aa13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 AHCYP23526 432 aa13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 IST1P53990 364 aa13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 NR1H2P55055 460 aa13.39□□□□□ -0.27
SNRPA1-213ENST00000560856 IL1RL1Q01638 556 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms