RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ALKBH3Q96Q83 286 aaPredicted RBP8.54□□□□□ -1.04
TPM1-225ENST00000560679 OR7D2Q96RA2 312 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 JMJD8Q96S16 334 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 SDF2Q99470 211 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 SUCNR1Q9BXA5 334 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 TMPRSS13Q9BYE2 586 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 S100A14Q9HCY8 104 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 DYNLRB1Q9NP97 96 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 C1orf109Q9NX04 203 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 TREM2Q9NZC2 230 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 FBXO9Q9UK97 447 aaPredicted RBP8.54□□□□□ -1.04
TPM1-225ENST00000560679 POMPQ9Y244 141 aa8.54□□□□□ -1.04
TPM1-225ENST00000560679 SPIN1Q9Y657 262 aaPredicted RBP8.54□□□□□ -1.04
TPM1-225ENST00000560679 IGHV2OR16-5A0A0B4J2B6 119 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 SH3PXD2BA1X283 911 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 ZNF503-AS2A6NEH8 195 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 BBIP1A8MTZ0 92 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 MRASO14807 208 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 FCMRO60667 390 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 IGKV3-15P01624 115 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 TFP02787 698 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 HPXP02790 462 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 ERCC1P07992 297 aaPredicted RBP8.53□□□□□ -1.04
TPM1-225ENST00000560679 HKR1P10072 659 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 ADRA2CP18825 462 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 CCT3P49368 545 aaKnown RBP8.53□□□□□ -1.04
TPM1-225ENST00000560679 PSME3P61289 254 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 TAF11Q15544 211 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 GPR68Q15743 365 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 GSTA3Q16772 222 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 RFTN2Q52LD8 501 aaPredicted RBP8.53□□□□□ -1.04
TPM1-225ENST00000560679 FAHD2BQ6P2I3 314 aaPredicted RBP8.53□□□□□ -1.04
TPM1-225ENST00000560679 GRINAQ7Z429 371 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 MIER2Q8N344 545 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 POMGNT2Q8NAT1 580 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 OR56A1Q8NGH5 318 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 OR5AK3PQ8NH89 298 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 YIPF5Q969M3 257 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 TUBGCP3Q96CW5 907 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 FAHD2AQ96GK7 314 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 RSRC1Q96IZ7 334 aaKnown RBP8.53□□□□□ -1.04
TPM1-225ENST00000560679 ZNF570Q96NI8 536 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 CDRT15Q96T59 188 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 ZNF350Q9GZX5 532 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 TUBB1Q9H4B7 451 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 PARPBPQ9NWS1 579 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 TMEM181Q9P2C4 612 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 FAF1Q9UNN5 650 aaPredicted RBP8.53□□□□□ -1.04
TPM1-225ENST00000560679 LRRC42Q9Y546 428 aa8.53□□□□□ -1.04
TPM1-225ENST00000560679 NUP214P35658 2090 aaPredicted RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 A0A096LPE4 126 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 TRAV20A0A0B4J274 112 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 A0A1W2PPZ6 126 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 TMEM72A0PK05 275 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 ZC3H12DA2A288 527 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 FBP2O00757 339 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 LSM1O15116 133 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 SCAMP2O15127 329 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 CFLARO15519 480 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 NCR1O76036 304 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 FSHBP01225 129 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 LINC00032P0C843 101 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 LAMP1P11279 417 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 IDO1P14902 403 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 CCNA2P20248 432 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 COL8A2P25067 703 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 GPR6P46095 362 aaPredicted RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 CLK1P49759 484 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 GTF2A1P52655 376 aaPredicted RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 RPL38P63173 70 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 POU3F1Q03052 451 aaPredicted RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 CEACAM7Q14002 265 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 HIST2H2BDQ6DRA6 164 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 PAQR6Q6TCH4 344 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 EIF3MQ7L2H7 374 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 AAED1Q7RTV5 226 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 FAM169BQ8N8A8 192 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 OR7A2PQ8NGA2 310 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 OR9K2Q8NGE7 335 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 SFXN5Q8TD22 340 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 NRG4Q8WWG1 115 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 DNAJC9Q8WXX5 260 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 MTERF3Q96E29 417 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 AURKBQ96GD4 344 aaPredicted RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 C1QTNF5Q9BXJ0 243 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 MRPL37Q9BZE1 423 aaKnown RBP8.52□□□□□ -1.05
TPM1-225ENST00000560679 NOX3Q9HBY0 568 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 AIG1Q9NVV5 245 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 TMEM45AQ9NWC5 275 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 GIMAP2Q9UG22 337 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 ATP6V1HQ9UI12 483 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 MKLN1Q9UL63 735 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 TRAPPC4Q9Y296 219 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 PPIAL4AQ9Y536 164 aa8.52□□□□□ -1.05
TPM1-225ENST00000560679 OR6C65A6NJZ3 312 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 CLDN24A6NM45 220 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 ZNF587BE7ETH6 402 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 AP3D1O14617 1153 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 ANKRD28O15084 1053 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms