RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 JAM3Q9BX67 310 aa9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 HOXD1Q9GZZ0 328 aa9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 YAE1D1Q9NRH1 226 aa9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 CNIH4Q9P003 139 aa9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 EXOGQ9Y2C4 368 aaKnown RBP9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 SPIN1Q9Y657 262 aaPredicted RBP9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 CLCA3PQ9Y6N3 262 aa9.49□□□□□ -0.89
KNSTRN-209ENST00000560220 PRKDCP78527 4128 aaKnown RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 UNC119BA6NIH7 251 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 H3BMH7 237 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 DNAJB6O75190 326 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 THY1P04216 161 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 CD63P08962 238 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 NID1P14543 1247 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 HTR1FP30939 366 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 LCN1P31025 176 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 FGF9P31371 208 aaPredicted RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 RORAP35398 523 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 ZNF136P52737 540 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 CDH11P55287 796 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 ACSM1Q08AH1 577 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 MGAT2Q10469 447 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 FUT7Q11130 342 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 ZNF267Q14586 743 aaPredicted RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 ELAVL1Q15717 326 aaKnown RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 MIDNQ504T8 468 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 RPL13AP3Q6NVV1 102 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 HSDL2Q6YN16 418 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 TMPRSS11AQ6ZMR5 421 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 ZNF620Q6ZNG0 422 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 MEX3DQ86XN8 651 aaKnown RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 NRMQ8IXM6 262 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 POGLUT1Q8NBL1 392 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 PSD4Q8NDX1 1056 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 OR2T33Q8NG76 320 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 OR4Q3Q8NH05 313 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 SETD6Q8TBK2 473 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 RNF217Q8TC41 542 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 THAP3Q8WTV1 239 aaPredicted RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 CHAC2Q8WUX2 184 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 HOXB13Q92826 284 aaPredicted RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 SLC35B4Q969S0 331 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 SLC25A46Q96AG3 418 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 CLIP3Q96DZ5 547 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 KCTD7Q96MP8 289 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 LMF1Q96S06 567 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 BARHL1Q9BZE3 327 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 TGIF2Q9GZN2 237 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 FOLH1BQ9HBA9 442 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 POLE4Q9NR33 117 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 SNTG1Q9NSN8 517 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 TXNL4BQ9NX01 149 aaKnown RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 H2AFY2Q9P0M6 372 aaPredicted RBP9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 COPS7AQ9UBW8 275 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 SLC7A7Q9UM01 511 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 TMEM5Q9Y2B1 443 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 CARD8Q9Y2G2 431 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 GSTK1Q9Y2Q3 226 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 CMAHPQ9Y471 501 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 TRRAPQ9Y4A5 3859 aa9.48□□□□□ -0.89
KNSTRN-209ENST00000560220 TRDV1A0A1B0GX56 115 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 OR6C76A6NM76 312 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 C17orf105B2RV13 164 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 WWP2O00308 870 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CDC123O75794 336 aaPredicted RBP9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CDRT1O95170 752 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 RCBTB2O95199 551 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CNOT4O95628 575 aaKnown RBP9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 LIMS3P0CW19 117 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 LIMS4P0CW20 117 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GTF2E2P29084 291 aaKnown RBP9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GABRA5P31644 462 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 SOX18P35713 384 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 MAP3K8P41279 467 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GPR4P46093 362 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GCGRP47871 477 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 SLC9A3P48764 834 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 TNFSF10P50591 281 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 DLX5P56178 289 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 DCDP81605 110 aaKnown RBP9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 MAT1AQ00266 395 aaKnown RBP9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 HOXC5Q00444 222 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CBX3Q13185 183 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 MFAP5Q13361 173 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GPR68Q15743 365 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 KRTCAP3Q53RY4 240 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CLEC12AQ5QGZ9 265 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 ARMC4Q5T2S8 1044 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 NXNL2Q5VZ03 156 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 HLA-DQA1Q5Y7H0 255 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 FAM198BQ6UWH4 519 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 GID4Q8IVV7 300 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 TMEM151BQ8IW70 566 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CMIPQ8IY22 773 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 CDK20Q8IZL9 346 aa9.47□□□□□ -0.89
KNSTRN-209ENST00000560220 ZNF527Q8NB42 609 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms