RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ZNF416Q9BWM5 594 aa10.96□□□□□ -0.65
RABGGTA-213ENST00000560127 LINC00470Q9BZP3 86 aa10.96□□□□□ -0.65
RABGGTA-213ENST00000560127 MYEF2Q9P2K5 600 aaKnown RBP10.96□□□□□ -0.65
RABGGTA-213ENST00000560127 GUSBP08236 651 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 NAT2P11245 290 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 SOAT1P35610 550 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 RPL3P39023 403 aaKnown RBP10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 SLC1A6P48664 564 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 HBA1P69905 142 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 KCNJ10P78508 379 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 IL13RA1P78552 427 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 PTGR1Q14914 329 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 AVPI1Q5T686 147 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 TMEM225Q6GV28 225 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 FRRS1Q6ZNA5 592 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 DOK3Q7L591 496 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 C16orf62Q7Z3J2 963 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 MAVSQ7Z434 540 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 C6orf120Q7Z4R8 191 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 OIT3Q8WWZ8 545 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 CNOT9Q92600 299 aaKnown RBP10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 COQ8BQ96D53 544 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 ATP6V1G3Q96LB4 118 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 C1orf50Q9BV19 199 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 C7orf69Q9H7B7 122 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 PNPOQ9NVS9 261 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 RAP2CQ9Y3L5 183 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 WDR45Q9Y484 360 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 TANC2Q9HCD6 1990 aa10.95□□□□□ -0.66
RABGGTA-213ENST00000560127 RPL36A-HNRNPH2H7BZ11 118 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 CFLARO15519 480 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 GLRXP35754 106 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 MAP2K6P52564 334 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 MVKQ03426 396 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 FUT5Q11128 374 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 C6orf136Q5SQH8 315 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 RBMS3Q6XE24 437 aaKnown RBP10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 KRTCAP2Q8N6L1 136 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 RAB39BQ96DA2 213 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 SLC35G5Q96KT7 338 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 PKP2Q99959 881 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 VIPAS39Q9H9C1 493 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 ZMAT3Q9HA38 289 aaKnown RBP10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 EXD2Q9NVH0 621 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 ATAD3AQ9NVI7 634 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 ADPRHL2Q9NX46 363 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 FZR1Q9UM11 496 aa10.94□□□□□ -0.66
RABGGTA-213ENST00000560127 CDC14BO60729 498 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 SCN2BO60939 215 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 PEX11AO75192 247 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 ZNF432O94892 652 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 IGHV2-5P01817 119 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 RNASE1P07998 156 aaKnown RBP10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 OR12D1P0DN82 309 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 ZNF35P13682 527 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 MDKP21741 143 aaPredicted RBP10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 GCH1P30793 250 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 MAGEB1P43366 347 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 STX3Q13277 289 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 FXNQ16595 210 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 HHATQ5VTY9 493 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 HDXQ7Z353 690 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 NATD1Q8N6N6 113 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 SYT14Q8NB59 555 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 MIPOL1Q8TD10 442 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 RAB8BQ92930 207 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 ROPN1LQ96C74 230 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 PPP1R36Q96LQ0 422 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 ZNF75AQ96N20 296 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 PAIP2Q9BPZ3 127 aaKnown RBP10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 ZNF385DQ9H6B1 395 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 GPR35Q9HC97 309 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 POLE3Q9NRF9 147 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 B3GNT2Q9NY97 397 aa10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.93□□□□□ -0.66
RABGGTA-213ENST00000560127 NOTCH3Q9UM47 2321 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 RNF103-CHMP3A0A140T963 221 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 PRAMEF27A3QJZ7 478 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 FAAHO00519 579 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 SDHDO14521 159 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 SEC14L2O76054 403 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 VAMP5O95183 116 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 CHRM4P08173 479 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 GATA3P23771 443 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 CAPZA2P47755 286 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 SRSF4Q08170 494 aaKnown RBP10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 BNIP2Q12982 314 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 CEACAM16Q2WEN9 425 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 LEG1Q6P5S2 330 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 RIMKLAQ8IXN7 391 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 CLECL1Q8IZS7 167 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 BCL6BQ8N143 479 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 XAGE5Q8WWM1 108 aa10.92□□□□□ -0.66
RABGGTA-213ENST00000560127 ZNF48Q96MX3 618 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms